Thermoanaerobacterium xylanolyticum: Thexy_1838
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Entry
Thexy_1838 CDS
T01505
Name
(GenBank) RNA methyltransferase, TrmA family
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
txy
Thermoanaerobacterium xylanolyticum
Brite
KEGG Orthology (KO) [BR:
txy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
txy03009
]
Thexy_1838
Enzymes [BR:
txy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Thexy_1838
Ribosome biogenesis [BR:
txy03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Thexy_1838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Methyltransf_15
Cons_hypoth95
Met_10
N6_N4_Mtase
PrmA
Methyltransf_11
Methyltransf_12
UPF0020
Methyltrans_SAM
Methyltransf_4
Methyltransf_32
PCMT
Ubie_methyltran
NodS
SAM_MT
TPMT
Motif
Other DBs
NCBI-ProteinID:
AEF17858
UniProt:
F6BIX3
LinkDB
All DBs
Position
complement(1909728..1911086)
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AA seq
452 aa
AA seq
DB search
MKKNEEIIINIDDMNLEGYGLSYLDDSIIKVRGAIKGQKVKAKIKRIIGKGIEADVVDII
ERSPLEHDNVCNHFGKCGGCAYLNINYKDQLKLKEDYVKSLLDEAGIKGFEFLGIVGSPD
VFSYRNKMEYTFGIDDNGIMQLGLHIKGRYYDIITTEDCRIVDSDFIACLKNVLDYAKQH
SLPHYNIKTHEGYMRNLVIRKAANTGEILINIVTTSQKKHDFSKLASELKNIKLKGKLVG
ILHTVNDSYSDAVKCEKLEVLYGRDYIMEEILGLKFKISAFSFFQTNSKGAERLYSVARE
FAGDISNKILFDLYCGTGTIGMIMAPLSKKVVGIELVEEAVDAARENARLNGLNNIQFIA
GDVAQRIKEINDKPDVVVLDPPRPGVNPKAVMDIIKLNPEKIIYVSCNPVSLVRDLKMLI
QRQYKVEKVKCVDMFPHTYHIETVVLLTNKKV
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaacgaagaaataataattaatatagatgatatgaatttagaaggttacggg
ttatcatatttagatgacagtattattaaagtgagaggtgccattaaaggacaaaaggta
aaggcaaaaataaaaagaataataggtaagggaattgaggcagatgttgtagatataatc
gagagatcacctttggaacatgataatgtatgtaatcattttggtaaatgtggcggctgt
gcatatttaaatataaattataaagatcaattaaaattaaaagaagattatgtaaaaagc
cttcttgatgaagcaggaataaaaggttttgagtttttagggattgtaggaagtcctgat
gttttttcgtatagaaacaagatggagtacacatttggaatagatgataatggtataatg
caattaggacttcacataaaagggcggtattatgacattataacgacggaggactgcagg
attgttgacagcgattttatcgcatgtttaaaaaatgttttggattatgcaaaacagcac
agcttgccacactataatataaagacacacgaaggctacatgagaaacttagtcattaga
aaagcggcaaatacaggtgaaattctcataaatatcgttacaacatcccagaaaaaacat
gattttagtaaactggcaagtgagcttaaaaatataaaattaaaaggaaaacttgtcggt
atattgcacaccgtaaatgatagctattctgatgcggttaaatgtgaaaaacttgaagtg
ctatatggcagagactatataatggaagaaatactgggccttaaatttaagataagcgca
ttttcattttttcaaactaattcaaaaggtgccgagagactctatagtgtagcaagggaa
tttgcaggtgatatatccaataaaattttatttgacttgtactgtggcacaggaactata
ggaatgataatggcaccactttctaaaaaagtcgtaggcatagaacttgttgaagaagcc
gtcgatgctgcacgagaaaatgctagattaaacgggcttaataatatacagtttatagca
ggcgacgtcgcacaaaggataaaagagataaatgataagccagatgtggtcgtattagat
cctccaagacctggagtaaatccaaaagctgtaatggacatcataaaattaaacccagaa
aagataatttacgtatcatgcaatcctgtgtcacttgttagggatttgaaaatgctgata
cagaggcagtacaaagtggaaaaggtaaaatgtgttgacatgtttcctcacacatatcac
atagagacggtggttctgttgacaaataaaaaagtatag
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