Thermoanaerobacterium xylanolyticum: Thexy_1853
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Entry
Thexy_1853 CDS
T01505
Name
(GenBank) DEAD_2 domain protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
txy
Thermoanaerobacterium xylanolyticum
Pathway
txy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
txy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Thexy_1853
09124 Replication and repair
03420 Nucleotide excision repair
Thexy_1853
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
txy03021
]
Thexy_1853
03036 Chromosome and associated proteins [BR:
txy03036
]
Thexy_1853
03400 DNA repair and recombination proteins [BR:
txy03400
]
Thexy_1853
Enzymes [BR:
txy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Thexy_1853
Transcription machinery [BR:
txy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Thexy_1853
Chromosome and associated proteins [BR:
txy03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
Thexy_1853
DNA repair and recombination proteins [BR:
txy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Thexy_1853
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
HBB
DEAD
ResIII
PDDEXK_1
DUF1706
Helicase_C
S-AdoMet_synt_N
Motif
Other DBs
NCBI-ProteinID:
AEF17872
UniProt:
F6BJ55
LinkDB
All DBs
Position
complement(1925132..1927471)
Genome browser
AA seq
779 aa
AA seq
DB search
MVKEKIKISVRDLVEFILRCGDLNNEFFGGSNLRALEGTKIHKKIQSSKDENYKKEVTLK
YEREFDEFIIAVEGRADGIIVDNGNVTIDEIKTTSANLGEIDGYYNPLHLAQAKCYAYIY
SIQNDLTTIDVQLTYYQIDNDEIKYLRYTYSIDELKTFFDDLIKKYYNWASMLYNWIKER
NSSIEKIDFPYKDFRKGQKKLMASVYKSIESGKKLFVQAPTGIGKTISTIFPSLKAMKKG
LTSKIFYLTAKTIARTVSEETFNTLRSKGLKVKTLVLTAKEKICFNEKTECTPEACMFAK
GHYDRINDAIMDIFLNEDNFNRSKIEEYAQKHMVCPFELSLDLSLWSDVIICDYNYVFDP
NVGLKRFFQDKTDFTLLVDEAHNLVDRSREMFSAELFKKDFLSLKKEIKGESIKLEKVLS
KINSIFLKLKKRCGEKGYFVTDEIFSDLNGYLRQFIGEVESFLSNERKSFVKDAIIDLYF
EVIRYLKVSDMYDELYTTYVEKKSDDLKFKLFCLDPSKLLSETLRKVRSTVFFSATLIPI
TYYMSLLGGSREDYGVCLDSPFETKNRMILIADDVSTKYKDREKTLEEIVGYIHTTVSKE
NGNYIVYFPSYEYLNMVYEIYKEKSTGYLLKQKSTMKENEKDDFLRMFEDGQNGVLAFCV
LGGVFSEGIDLTKDRLIGAIIIGVGIPQICLERDIIRDYFERKYGLGYEFAYLYPGFNKV
LQSAGRVIRTEEDKGIILLIDERFLQKNYIRIFPKEWFPYTKVNQSNLGFHLDSFWRSF
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggttaaagaaaagataaagatttcagtcagagacttggttgaattcatattgaggtgt
ggagatttaaacaatgaattttttggtggcagcaatttaagggcattagaaggcacaaag
attcacaaaaaaattcaaagttctaaagatgagaattacaaaaaagaagtaacgttaaag
tacgaaagagaatttgatgagtttatcattgctgtagaaggtcgcgcagacggcatcatt
gtagataatggcaatgtaacaattgatgagataaagactacgagtgccaatttaggtgaa
atagatggatactacaatcctctgcatttagcgcaggcaaaatgttatgcatacatttat
tcaattcaaaatgacttgactaccatagatgttcaacttacgtattatcaaatcgataat
gacgagattaaatatttgagatacacgtattctatagatgagctaaaaactttttttgat
gaccttattaagaagtattacaattgggcaagcatgttatacaattggataaaggaaaga
aacagttccatagaaaaaattgattttccatataaagattttcgaaaagggcaaaaaaag
cttatggcatctgtctacaaatctattgaaagtgggaaaaaactttttgttcaagctcca
acagggatagggaaaaccatatctacaattttcccatctttgaaggcgatgaaaaaagga
ttaacttcaaaaatattttaccttactgcaaagacgatagcccgaacggtgtcagaggaa
acatttaatacactgagaagcaaagggcttaaagtaaaaacattggttttaaccgctaaa
gagaaaatatgctttaatgaaaaaaccgaatgtacgcctgaagcatgtatgtttgcaaaa
ggccattatgataggataaatgatgctataatggatatatttttgaatgaagataatttt
aatcgttcaaaaattgaagagtatgctcaaaagcatatggtatgcccatttgagctttca
ctggacttatctttgtggtcagatgttataatatgcgattacaattacgtctttgatcca
aatgtgggacttaaaaggttctttcaagacaaaactgattttacacttctcgtagatgaa
gcgcacaatttggtggatagatcgagagagatgttttcagcggaattattcaaaaaagat
tttttgtcgttaaagaaagagattaagggtgaaagcatcaagcttgaaaaggtattgtca
aaaatcaattcaatatttcttaaattgaagaaaagatgtggtgaaaaaggctactttgtc
acagatgagatatttagtgatctaaatggatatttaagacaatttataggagaagtggaa
tcgtttctttcaaatgaaagaaagtcatttgttaaagatgccatcattgatctgtatttt
gaagtgattaggtatcttaaagtttctgatatgtacgatgagttatatacgacttatgtt
gagaaaaaaagcgacgacttaaaattcaaattattttgcttagatccctctaagctgctt
agtgaaacgcttagaaaagtgcgaagcactgtgtttttttcggctacacttattcctata
acgtattatatgtctttattaggtggtagccgagaagattatggtgtttgtcttgattcg
ccatttgaaactaaaaaccggatgatacttattgcggatgatgtgtctacaaaatacaag
gatagagaaaaaactttggaggaaatagttggatatatacatacaacagtgtcaaaggaa
aatggaaattatattgtatattttccatcttatgaatatttaaacatggtgtatgagatt
tacaaggagaaaagtacaggctatttacttaagcagaaaagcacaatgaaagaaaatgaa
aaagatgattttttgcgcatgtttgaggacggtcaaaatggtgttttggccttttgtgta
ctgggtggtgttttttcagaaggcatcgatttgacaaaagatcgtttgataggcgccata
ataataggtgtaggtatacctcagatatgtcttgaaagggatataattagagattatttt
gaaaggaaatatggactgggctatgaatttgcttacctttatccaggctttaacaaagtc
ttgcagtcagcaggacgtgtcataagaacggaagaagataagggaataattttgcttata
gatgaaagatttttgcaaaaaaattacattaggatatttcctaaagaatggtttccttat
acaaaggtgaatcaaagcaatttaggatttcatcttgatagtttttggaggagtttttaa
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integrated database retrieval system
