Tuanshanicoccus yangjingiae: JDW14_04460
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Entry
JDW14_04460 CDS
T11391
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
tya Tuanshanicoccus yangjingiae
Brite
KEGG Orthology (KO) [BR:
tya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tya03019
]
JDW14_04460
Messenger RNA biogenesis [BR:
tya03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JDW14_04460
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
tRNA_anti_2
Ufd2P_core
Motif
Other DBs
NCBI-ProteinID:
QQD66500
LinkDB
All DBs
Position
931581..932516
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AA seq
311 aa
AA seq
DB search
MKDVQVGEEFALFVLLKSADVRVAKNGNPFIAFSFQDSSATIEGMYWSATEEEIDRFKAG
RVVFLRGEKDLYQGKPQVKIKQIRLAEAGEPDDPTLYVEHIGVKRSEIESEINEAIFLIK
EPNIIRVVHKVLKMVDEDFYVFPAAKRHHHAMAGGLSFHTVSMLRIARALLKIYPDLNAS
LLISGVILHDIGKTIELSGAISTEYTLKGKLMGHLVLMSELIDRACTEIGINPEMESIIL
LKHVVLAHHGKLEFGSPVVPQILEAELVHQIDLMDANINMMLTAVNKVEGGDYSEPVYAL
DRRQFYKPKFK
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagatgttcaagtaggagaagaatttgcattatttgtattattaaagagtgcagat
gtacgtgttgcaaaaaatggtaatccatttatcgcatttagttttcaagattcgtctgct
acgattgaaggaatgtattggtcagcgactgaggaagaaatagatcgctttaaagctgga
cgtgttgtctttttacgtggagaaaaagatttatatcaaggtaagccacaagtaaaaatt
aagcaaattcgtttagctgaagcaggtgagccggatgatcctactttatatgttgaacat
attggtgtaaaacgttccgaaattgagagtgagattaatgaagctatttttctgataaaa
gaaccaaatattattcgagtcgtacataaagttttgaaaatggtggatgaagatttctat
gtctttccagctgcaaaacgtcatcatcatgcaatggctggtggcttaagtttccataca
gtttcgatgttgcgtattgcacgtgctttgctaaaaatttatccagaccttaatgccagc
ctgttaatttctggtgtgattttacatgatattgggaaaacgattgagttgagtggagcg
atttcgacagaatatacgttaaaaggcaagttaatggggcatttagtattgatgagtgag
ctaatcgaccgtgcttgtacggagattggtattaatcctgaaatggaatccattattttg
ctaaaacatgttgtgctagcgcatcatggtaaactggagttcggtagtccagttgtccca
caaattttagaagctgaattggtacatcaaatcgatttaatggatgctaatatcaatatg
atgttaacagctgtcaataaagttgaaggtggcgattattcagaaccagtttatgcatta
gacagacgccaattttataaaccaaaatttaaataa
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