Tuanshanicoccus yangjingiae: JDW14_04715
Help
Entry
JDW14_04715 CDS
T11391
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
tya Tuanshanicoccus yangjingiae
Pathway
tya03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tya00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JDW14_04715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tya03400
]
JDW14_04715
Enzymes [BR:
tya01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
JDW14_04715
DNA repair and recombination proteins [BR:
tya03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JDW14_04715
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
UvrD-helicase
AAA_22
nSTAND3
AAA_28
T2SSE
AAA_12
AAA_16
Gal11_ABD1
DUF473
AAA_29
RsgA_GTPase
AAA
cobW
AAA_18
UvrD_C
NPHP3_N
Mg_chelatase
AAA_23
Motif
Other DBs
NCBI-ProteinID:
QQD66402
LinkDB
All DBs
Position
980663..983116
Genome browser
AA seq
817 aa
AA seq
DB search
MSEVLIVGQLDAIYFENPTNLYKVIRVMVDDELTEVLTHSEIVCTGQFATLHYDTMYEFY
GNFTTHPKFGEQFSVTRYQQMAPTSEKGLVDYLSSDRFKGIGGVLAQRIVDQLGMDAIEL
IIQDGDVLKSIKGITSQKQQDLREALLKFQGTERVFMQLSEWGFTPKFADKIYQKYKSAA
IEKIKENPYQLIEDVEGIGFSKADLLAEMLGIEPDSLDRIVAAYYTVILEHCYQNGDTYL
LESISRQQTQKLLESARPYLISDELMNLALDKAIMEKKLVRILEGLMIPSLYFAEIGIAE
RLYKHIQYAQIEQFEESVIDEAIQEVIETTGIQYDQQQQQALKFAMQSPCSIITGGPGTG
KTTLVKGLIALHSILHEYELSSITKYGDFQPILLAAPTGRAAKRMNEMTDLPAQTIHRML
GYTRDSNVEEFSSSVELEGNLLIVDEMSMVDTWLMNWLIQAIPYQMQVVFVGDRDQLPSV
GPGKVFNDLIASQSIPTIKLEKVYRQGQDSSIISLAHEIRQGKIPADLLDKQIDRSFIPC
APNQVVDVVRQIVEQAKKKQYDSTNMQVLAPMYKGPAGINQLNEQLQVIMNPAKKGLREI
TYFEQTFRVGDKVLQLVNNAEADVYNGDIGKIVAIFNKNETESNVEEVLVEFEQRELTYK
RSDLDQLTLAYCCSVHKAQGSEYPLVILPLVDLHSRLLRKDLLYTAVTRAKQRLVLVGNP
NSFVKAATSATEPRATFLKDMIQLKMKNQVKKGVEFVAENEPIADETVSEVAESSVATLV
KTDVSAEKETIDVLTEDTIWSIDPMIGMDGISPYDFM
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
ttgagtgaagtgcttattgtaggacagttagatgcgatttattttgaaaatccgaccaac
ttatataaggtaattcgtgtcatggttgatgatgagttgacggaagttttaactcattcg
gaaattgtttgtacagggcaatttgccaccttgcattatgatacaatgtatgaattttat
ggcaattttacaacacatcctaaatttggtgagcaattttcagtgacacgctatcaacaa
atggctcccacttctgaaaaaggtttagtcgattatttatcaagtgaccgttttaaaggg
attgggggagtcttagcacaacgtatcgttgaccaattaggaatggacgcaattgaactg
attattcaagacggcgatgtattaaagtcgataaaaggtataaccagtcaaaagcaacag
gatttacgtgaggctctactgaagtttcaaggaactgaacgtgtttttatgcagttgagc
gaatggggattcactccaaagtttgctgataaaatttatcaaaagtataagagtgcggcg
attgagaaaattaaagaaaatccatatcaattaattgaagacgtagaggggattggtttt
tctaaggcagatttgttagcagaaatgctaggcattgaaccggattcactcgaccgtata
gtagcagcttattatacggtgattttagagcattgttatcaaaatggtgatacttattta
ttggaatctattagtcgtcagcaaacacaaaaattattagagagtgcacgaccgtatttg
attagtgatgagttgatgaatttggctttggataaggcgattatggagaagaaactcgtt
cggatactcgagggtttgatgattccaagtctatatttcgctgaaattgggattgcagaa
cgtttatataagcacattcaatacgcacaaattgaacaatttgaagaaagtgttatcgat
gaggcaattcaagaagttatcgaaaccacaggtattcaatatgaccaacaacagcagcag
gcattgaaatttgcaatgcagtcaccttgttcgattattactggtggaccaggtacaggg
aagactactttagtaaaaggattaattgccttacactcgattttacatgaatatgagcta
tcttctataacgaaatatggcgattttcagccgatattattggctgcacctactggacga
gcagcaaaacgtatgaatgagatgactgatttaccagctcagacgattcatcgaatgtta
ggctatactcgagatagtaatgtggaagaattttctagcagtgttgaacttgagggaaat
ttattaattgtcgatgagatgtcaatggtcgatacttggttaatgaactggttaattcaa
gcgattccgtatcaaatgcaagtggtatttgtaggcgaccgagaccaattgccgtcagtt
ggcccaggaaaagtgtttaatgatttaattgccagtcaaagtattccgacgattaaattg
gagaaagtctatcgtcagggacaagatagttccattatttccttagcacacgaaatccga
caaggaaaaattccagctgacttattagacaaacaaatagaccgtagctttattccttgt
gcaccgaaccaagtagttgatgtcgtgcgtcaaattgtggagcaagctaaaaagaaacaa
tatgacagcactaatatgcaagtgttagcaccgatgtataaaggccctgctgggattaat
cagctgaatgagcagttacaagttattatgaatccagcgaaaaaaggattacgagaaatt
acttattttgagcagacattccgagtaggggataaagtattacaattggttaataatgct
gaagctgatgtttataatggtgacattggtaaaattgtagcgatttttaataaaaatgaa
acagaatcgaatgttgaagaagtactggttgaatttgagcagcgagaattaacatataaa
cgttccgatttagaccagttgactttggcttattgttgttcggtacataaagcacagggg
agtgagtatcctttagttattttgccactggttgatttacattcacgattattgcgtaaa
gatttattatatacggcagtcacaagagcgaaacagcgacttgtattagtaggaaatccg
aatagctttgtaaaagcagcaacgagcgctactgaaccacgtgcgacatttttaaaagat
atgattcaactgaagatgaagaaccaagttaaaaaaggtgttgaatttgtagctgaaaat
gagccgatagctgatgaaacagtttcggaagtagctgaaagcagtgtggctactttagtg
aaaactgatgtttcagctgaaaaagaaactattgatgtcttaacggaagatacaatttgg
tcgattgacccgatgataggtatggacggtatttcgccgtatgattttatgtaa
DBGET
integrated database retrieval system
