Tuanshanicoccus yangjingiae: JDW14_06350
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Entry
JDW14_06350 CDS
T11391
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
tya Tuanshanicoccus yangjingiae
Pathway
tya03410
Base excision repair
tya03430
Mismatch repair
tya03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tya00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JDW14_06350 (recJ)
03430 Mismatch repair
JDW14_06350 (recJ)
03440 Homologous recombination
JDW14_06350 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tya03400
]
JDW14_06350 (recJ)
DNA repair and recombination proteins [BR:
tya03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
JDW14_06350 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
JDW14_06350 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
JDW14_06350 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QQD64950
LinkDB
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Position
complement(1357761..1360100)
Genome browser
AA seq
779 aa
AA seq
DB search
MRRSQYYWQYPSVSDETAEQLNQLQLAGLNYSPAFLRLCLQRGLNTPQAIQQATNQEPQL
YHDPFLLYDMDRAVERLHQAIERGEHILIYGDYDADGITSTLILVECLESLGANYSYYLP
NRLIDGYGPNLNRYKQKIEEDGVQLILTCDNGVAGFEAIDYAMQQNVDVIVSDHHELPPT
LPDAYAIVHPKHPKGDYPFKELCGAGVALKLAHALTGELPAEALELAAIGTIADLVSLTD
ENRTLVLSGLGMMKETVRLGLEMLLTQEKVNLQEINTETIGFIVGPRLNAIGRLGDPTPA
LELLRAEDEDEALALLQIINEQNKERQSIVTTITQQVIQRIEAKGAIPDIIIEADADWPA
GVLGIVASRLVEQYHRPALIFQYLTEKEQFRGSGRSIAGINLFRWLSEQSEYIAQFGGHD
QAAGLTIDAQQWELFNQSMADSAIDFREILAQKPELCIDVCIQPEECTVEFIQECAQLGP
FGMDNPKPMIAFDPVQLKQKRLIGSDQQHVKFVVADIDSDKSVEGIGFNKAALFETINLQ
QECAIAGELSLNQWNGQITPQVQLKDLAVFGMQWRDFRASKINPAILSAQKALFMYQQSA
LGEWLKQHINTSSVIASYDEIETFDLSEFEHLVLFQPPANLKSFDNLMQHSWALVDLGVY
LEESKWLAGLPTRADFAMIYRWIQQQKEPINVRNTLPQLSKQFNLPIVKLKGIFHVFFEA
NFVTINNGFAVAQVIDSNTKHDLFKTSAYQQYEKAYQAEALLNYQTIDQIKLYIDELRN
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgttctcaatattattggcaatatccgtcggtttccgatgaaactgcagagcaa
ctcaatcaattacaattggcgggactgaattattcacccgcttttctgcgtttatgcttg
cagagaggtttaaatacgccacaagcgattcaacaagctaccaatcaagaaccacaactt
tatcatgacccatttttactttacgatatggatagggctgtcgagcgattgcaccaagca
atcgagaggggcgaacatattttaatttacggagattatgatgcagacggtattacaagt
accttgattctcgttgaatgccttgaaagtttaggtgctaattattcgtactatttgccg
aatcgcctaattgacggctatgggccgaatttgaatcgatataagcaaaaaattgaagaa
gacggtgtgcagctgattttaacttgtgacaatggagtagctgggtttgaggcgattgac
tatgcaatgcaacaaaacgtagacgttattgtatcggatcaccatgaattgccaccaact
ttgcctgatgcttatgcgattgttcaccccaaacaccctaaaggtgattatccatttaaa
gaattgtgtggtgcaggagttgcattaaaattagctcatgcgttgactggtgaattaccg
gctgaggcattggaattggcagcgattgggacgattgctgacttagtgtctttgacggat
gaaaatcgtacgctcgtattgagtggactaggaatgatgaaagaaacggtccgattggga
ttggaaatgttattgactcaagaaaaagtcaatttacaagaaattaatactgaaactatt
ggttttattgttgggccgagattaaatgcgattggccgattaggagatccgacgccagca
ctcgagctattaagggcagaagacgaagatgaagcactcgctttactacaaataatcaat
gaacaaaataaggaacggcaatcaatcgtcacgactattacacaacaagtgattcaacga
attgaagcaaaaggggctattccagatattattatcgaagctgatgccgattggccagcc
ggagtgttgggcattgtagcgagcagattagttgaacaatatcatcgtccagcgttaatt
tttcaatatttaactgaaaaagagcaatttcgtggcagtggacgcagtattgctggaatt
aacttgttccgttggttaagtgagcagtcagagtatattgcacagtttggtggtcatgac
caggcagctggtttaacgattgatgcacaacaatgggagttgtttaatcaatcaatggca
gattctgctattgattttcgtgagattttggcacaaaaaccagaactttgtattgatgtt
tgcattcaaccagaagaatgtaccgttgaatttattcaagaatgtgcacaattaggacca
tttggtatggataatcctaaaccaatgattgcctttgacccagtgcaattaaagcaaaag
cgtttgattggtagtgaccaacaacatgttaaatttgtggtggcagacattgatagcgat
aagtcagttgaggggattggttttaataaagcagctctgtttgaaacgattaatttgcaa
caagaatgtgcgattgctggagaattatccttaaatcaatggaatggacaaataacgcca
caagtgcaattaaaagatttagctgtttttggtatgcaatggcgagattttcgagcatca
aaaatcaatccagcgatattatctgctcaaaaagcattattcatgtatcagcagtctgct
ttaggtgaatggcttaagcaacatattaatacttcaagtgtgattgcatcgtatgatgag
attgaaacttttgatttatccgagtttgagcatttggttttatttcagccaccagcaaat
ttaaaatcatttgataatttaatgcaacattcatgggcattagttgatttaggtgtgtat
ttagaagaatcgaaatggttagcaggtttaccgactagagccgactttgcgatgatttac
cgttggattcagcagcaaaaagaaccaatcaatgtgcgaaatactttaccacaattaagt
aaacaatttaatttaccgatagtgaaattaaaaggtatatttcacgtgttttttgaagca
aattttgttacaataaataatggttttgctgttgcacaagtcattgattctaatacaaaa
catgatttgttcaaaacgagtgcttatcaacagtatgaaaaggcatatcaggcagaagca
ttactaaattatcaaacaatcgatcagattaaattatatatagatgaattgaggaattaa
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