Tuanshanicoccus yangjingiae: JDW14_08505
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Entry
JDW14_08505 CDS
T11391
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
tya Tuanshanicoccus yangjingiae
Pathway
tya03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tya00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JDW14_08505 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tya03019
]
JDW14_08505 (groL)
03110 Chaperones and folding catalysts [BR:
tya03110
]
JDW14_08505 (groL)
03029 Mitochondrial biogenesis [BR:
tya03029
]
JDW14_08505 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tya04147
]
JDW14_08505 (groL)
Enzymes [BR:
tya01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
JDW14_08505 (groL)
Messenger RNA biogenesis [BR:
tya03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
JDW14_08505 (groL)
Chaperones and folding catalysts [BR:
tya03110
]
Heat shock proteins
HSP60 / Chaperonin
JDW14_08505 (groL)
Mitochondrial biogenesis [BR:
tya03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
JDW14_08505 (groL)
Exosome [BR:
tya04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
JDW14_08505 (groL)
Exosomal proteins of other body fluids (saliva and urine)
JDW14_08505 (groL)
Exosomal proteins of breast cancer cells
JDW14_08505 (groL)
Exosomal proteins of colorectal cancer cells
JDW14_08505 (groL)
Exosomal proteins of bladder cancer cells
JDW14_08505 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
UPF0181
Motif
Other DBs
NCBI-ProteinID:
QQD65324
LinkDB
All DBs
Position
complement(1816122..1817735)
Genome browser
AA seq
537 aa
AA seq
DB search
MAKELKFSEDARAALLRGVDILANTVKTTLGPKGRNVVLDKTFGSPLITNDGVTIAREIE
LEDRFENMGAQLVMEVASKTNDVAGDGTTTATVLTQAIAREGMKNVTAGANPVGIRRGID
LATRVAVEALQELSQPVSSKEAIAQVAAVSSGDHEIGALIADAMERVGNDGVITIEESKS
IETELSVVEGMQFDRGYLSQYMVSDNEKMVANLEAPLIFITDRKVTNIQDVLPLLEEVMQ
SGRPLLIIAEDVDGEALPTLVLNKLRGTLNVVAVKAPGFGDRRKAMLEDIAVLTGATVIS
EELGYELKDATVAHLGHAGKVTVTKDATTIVEGAGDKQAIANRIAIIRAQAEETTSSFDK
EKLQERLAKLSGGVAVIKVGAATETEQKERKLRIEDALNATRAAVEEGIVAGGGTALVNV
QDKVLAIEATGDEATGVAIVARALEEPVRQIAENAGKEGSVVVNELHRSEKGIGYNAAND
TFENMIESGIVDPTKVTRSALQNAASVAALLLTTEAVVAEIPKESPEMPMGGMPGMM
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaattgaaattttcagaagatgcacgtgcagctttgttgcgtggggttgat
attttagcaaatacagtaaaaacaacattaggaccaaagggacgcaatgtagtattagat
aaaacatttggttctccattgattacaaatgacggtgtgacaattgcgcgtgaaatcgaa
ttagaagaccgttttgaaaatatgggtgcacagttagtaatggaagttgcatctaaaacg
aatgacgtagctggtgacggaacgacaacggctacagtattgacgcaagcaattgcacgt
gagggaatgaaaaatgtgacggctggagctaacccagtaggtatccgtcgtgggattgat
ttagcaactcgtgtagcagtggaagcattacaagagttatcacaaccagtttcatcaaaa
gaagcaattgcacaagttgcagcagtttcttcaggtgatcatgagattggtgcgttgatt
gcagatgcaatggaacgagtaggtaatgacggtgttattacgattgaagagtctaaatct
attgaaacagaactatctgttgtagagggaatgcaatttgatcgtggttatttatcacaa
tatatggtttcagacaatgaaaaaatggtagcaaatttagaagcaccacttattttcatt
acggaccgtaaagtgacaaacattcaagatgtattaccattattggaagaagtaatgcaa
tctggacgtccattgttaattattgcagaagatgttgacggtgaagctttaccgacatta
gtattgaataaattacgtggtacattaaatgttgtggcggttaaagcacctggatttggt
gaccgtcgtaaagcaatgttagaagatattgctgtcttaacaggtgcgacagttatttca
gaagaattaggttatgagttgaaagatgcaacagtagcacatttaggtcatgcaggcaaa
gtaacggtaaccaaagatgcaacaacgattgttgagggagcaggcgataaacaagcgatt
gcgaatcgtatcgctattattcgtgctcaagcagaagaaacaacttctagctttgataaa
gaaaaattacaagagcgtttagcaaaattatctggtggggtggcagtgattaaggtaggt
gctgctactgaaacagaacaaaaagaacgtaaattgcgtattgaagatgctttaaatgca
acacgtgcagccgtcgaagaaggaattgttgctggtggtggtacagcattggtgaatgta
caagataaagtattagcaattgaagcgactggtgatgaagcgactggtgtagcgattgtt
gcacgtgctttggaagaaccagtacgtcaaattgctgaaaatgcaggtaaagagggttca
gttgtagtcaatgaacttcatcgttcagaaaaaggcatcggttataatgctgcgaatgat
acatttgaaaacatgattgaatcaggtattgtagatccaacgaaagtaacacgttctgct
ttacaaaatgctgcgtcagtagctgctttattattaacaactgaagcagttgtcgcagag
attccaaaagagtcacctgaaatgccaatgggtggcatgccagggatgatgtaa
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