Thermodesulfovibrio yellowstonii: THEYE_A0037
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Entry
THEYE_A0037 CDS
T00775
Name
(GenBank) DNA polymerase III PolC-type, putative
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tye
Thermodesulfovibrio yellowstonii
Pathway
tye03030
DNA replication
tye03430
Mismatch repair
tye03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tye00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
THEYE_A0037
03430 Mismatch repair
THEYE_A0037
03440 Homologous recombination
THEYE_A0037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tye03032
]
THEYE_A0037
03400 DNA repair and recombination proteins [BR:
tye03400
]
THEYE_A0037
Enzymes [BR:
tye01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
THEYE_A0037
DNA replication proteins [BR:
tye03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
THEYE_A0037
DNA repair and recombination proteins [BR:
tye03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
THEYE_A0037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
CAF1
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
ACI20190
UniProt:
B5YGW1
LinkDB
All DBs
Position
complement(40474..41151)
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AA seq
225 aa
AA seq
DB search
MFKFFRKNRIESEIFRNKEFVVIDTELTGLDEKNDSIISIGAITMRERSILIGDIFYRIL
NPQCKPKDKAVLIHKLTSTELEQCPDIKLILKEFIDFIKNRPIVGHFIEIDIKFLRKETS
KWLNTGFTPEAIDTYIIFNWLIEREIISKKFKGAKSLPEIAEAFDIKVDMLHDALYDAFI
TAQIFQREIIMVQKINASWFDLLKKIGKPTVSGYMFGKYEKNYQF
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaattttttagaaaaaacaggatagaatcagaaattttccgtaataaagaattt
gttgttattgataccgaactcacaggattagatgaaaaaaatgacagtattatatccatc
ggcgcaatcacaatgagggaaagaagcattttaattggggatattttctatagaatttta
aatcctcagtgtaagccaaaagacaaagctgtattaatacataaattgacatcaacggag
ttggaacaatgtcctgatataaaacttattcttaaagaatttattgactttatcaaaaat
agaccaattgtaggacattttattgagattgatattaagtttctgagaaaggagacttca
aaatggctaaatacaggcttcactcctgaagcaattgatacatacataatatttaactgg
ttaatagaaagagaaattatatctaaaaaattcaaaggagcaaaatcattgcctgaaata
gcggaagcctttgatataaaagtagacatgcttcatgatgctctctatgatgcctttata
acagcacaaatttttcaaagagagattatcatggttcaaaaaatcaatgcttcctggttt
gatttactgaaaaaaatagggaaaccaactgtatccggatacatgtttgggaaatatgaa
aaaaactatcaattttaa
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