Thermodesulfovibrio yellowstonii: THEYE_A0217
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Entry
THEYE_A0217 CDS
T00775
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tye
Thermodesulfovibrio yellowstonii
Pathway
tye03420
Nucleotide excision repair
tye03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tye00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
THEYE_A0217
03430 Mismatch repair
THEYE_A0217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tye03400
]
THEYE_A0217
Enzymes [BR:
tye01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
THEYE_A0217
DNA repair and recombination proteins [BR:
tye03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
THEYE_A0217
MMR (mismatch excision repair)
Other MMR factors
THEYE_A0217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
ADDB_N
AAA_11
AAA
Motif
Other DBs
NCBI-ProteinID:
ACI21648
UniProt:
B5YI00
LinkDB
All DBs
Position
complement(221620..223284)
Genome browser
AA seq
554 aa
AA seq
DB search
MNLNKNQKIAVETSDRYLCILAGPGTGKTLTITAKIIHLLNSGINPEEIAALTFTQKAAI
EMRERVLNNLHKKEDLPFIGTFHLLCIKLLREFLPEKEKYFKICTRAMQKEIISVLSNKN
PDKIIEKITKFKNTGLNLDEKTTEFYEKYEQKKIELNLLDFDDLLIKTLHLLNKKIIPPL
FSHIIIDEFQDINKIQYEIIKKLLKKEGSLSVFGDPDQAIYSFRGSEIDLFLNLPKDFKN
LTLINLSLNYRSQANIIYASNKFITANIKRFSKKIEPLRQKGSKLTLIEVEDEYDEGKTI
VKEIKSRLGASDFTETYGNREETQCTFSNFAVLARTNRQLKIIKDFLAKAGIPVKTIRRD
TETWIASIVKKLTELISGGYTSKKILKDIRLSEFLESSGILEGLNDLEVSMLKNISKSYD
TGKLLEQIHAFIDELSGLTSFDLFPENLNAVSLLTFHASKGLEFPVVFITGFEEGLVPYT
LSSDYDLEEERRLFYVGMTRAMNDLIIIHAKNRLINGKKLSLPISSFIKEIPSECIAIKE
VRIKKDVPKQNGLF
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgaataaaaatcagaaaatagctgttgaaacttcagacagatatttatgcatt
ttagcaggacctggaacaggcaaaactcttacaattacagcaaaaattatccatctttta
aatagtggtataaatccagaagaaatagctgctcttacattcactcagaaagctgctatt
gaaatgagagagagagttttaaacaatttgcataaaaaagaagatttgccttttataggc
acttttcatcttttatgcataaaacttttaagagagttccttcctgaaaaagaaaaatat
tttaaaatctgtaccagagcaatgcaaaaagaaattatttctgttcttagcaataaaaat
ccagacaaaattattgaaaaaataacaaaatttaaaaatacagggttaaatcttgatgaa
aaaactacagaattttatgaaaaatacgaacagaaaaaaatagaattaaatcttcttgac
tttgatgatctattgattaaaaccttgcatttactcaataaaaaaataattcctcctctt
ttttctcatataattattgatgagtttcaggatatcaataaaatccagtatgaaattatt
aaaaaacttcttaaaaaagaaggttctttatcagtttttggcgatcctgaccaagccatc
tactcatttagaggttcggaaattgatctttttctaaatttacctaaagatttcaaaaat
ttaactctgataaacttatctttaaactatcgttcacaggcaaatatcatatatgcttca
aataaatttattacagctaacataaaaagattttcaaagaaaattgaacccttaagacaa
aaaggctctaaattaactttgattgaggttgaggatgaatatgatgaggggaaaaccatt
gttaaagaaataaaatcaagacttggcgcatcagacttcacagaaacctatggaaacaga
gaagaaactcaatgtacattttcaaattttgctgtgctggcaagaacaaacaggcaactg
aaaattattaaagattttttggctaaagcaggaatccctgtaaaaacaatcagaagagat
actgaaacatggatagcttcaattgtaaaaaaacttactgaacttatatcagggggatat
acatcaaaaaaaattttaaaagacatacgtctatctgaatttcttgaatcttcaggaata
ctggaaggacttaatgacttagaggtttcaatgttaaaaaatatttcaaaatcatacgat
acaggcaaactcttagaacaaattcacgcatttattgatgaactctcaggacttacatct
tttgaccttttccctgaaaacctaaatgcagtaagtcttcttacttttcatgcttcaaaa
ggacttgaattccctgttgtttttataacaggctttgaagaaggacttgttccctacact
cttagttcggattatgacttagaagaagaaagaagacttttttatgttggaatgacccgt
gcgatgaatgacttaataataatccatgcaaaaaacagattgatcaatggtaaaaagtta
tccctacctatttcctcttttataaaagagataccatcagagtgtatagcgataaaagaa
gtcagaattaagaaagatgttcctaaacagaatggacttttttag
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