Thermodesulfovibrio yellowstonii: THEYE_A0631
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Entry
THEYE_A0631 CDS
T00775
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
tye
Thermodesulfovibrio yellowstonii
Pathway
tye03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tye00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
THEYE_A0631 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tye03021
]
THEYE_A0631 (rho)
03019 Messenger RNA biogenesis [BR:
tye03019
]
THEYE_A0631 (rho)
Transcription machinery [BR:
tye03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
THEYE_A0631 (rho)
Messenger RNA biogenesis [BR:
tye03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
THEYE_A0631 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
DUF3086
AAA_25
OB_RNB
S1CSD-TOTE-2
AAA_22
Spore_III_AA
AAA
AAA_16
ResIII
Motif
Other DBs
NCBI-ProteinID:
ACI21158
UniProt:
B5YJQ9
LinkDB
All DBs
Position
complement(621904..623175)
Genome browser
AA seq
423 aa
AA seq
DB search
MENNTIPISISELKQKKIPELMDMANSLNIENATSMKKQDLIFAILQSQIEKIGTVYGAG
VLEILPEGFGFLRSPDYSYLPSPDDIYVSPSQIRKFGLRTGDLITGQIRPPKENERYFAL
LKVESINGKPVEESIIRPLFDNLTPYYPTEKINLEYNPADYSTRVMDLLTPVGKGQRGLI
VAAPRTGKTMLLQSIAKAIKKNHSEIYLIVLLIDERPEEVTDWRRQVTGAEIISSTFDEP
AQRHCQVSEMVIERAKRLVEEGEDVVILLDSLTRLARAYNAITPASGKVLSGGLEATALQ
KPKRFFGTARNIEEGGSLTIIATALVETGSRMDDVIFEEFKGTGNMEVHLDRKLADKRIF
PSIDIGASGTRKEELLVAPDVLNKVWILRKVLSTLSPIEAMEFLLSKLKGTKSNKEFLEM
MNK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacaataccattccaatttctatttctgaattaaaacagaaaaaaattccagag
cttatggatatggcaaattctctgaacattgagaatgccacttccatgaaaaaacaggat
ttaatttttgcaatacttcaaagccagattgaaaaaattggaactgtttacggtgcaggt
gtacttgaaattcttccagaaggattcggttttctgagaagtcctgattacagttatcta
ccaagccctgatgacatttatgtttcgccttcccagataagaaaattcggtttgaggaca
ggagaccttatcacaggacagattagacctccaaaagaaaatgaaagatattttgcactt
cttaaagtagaatcaattaatggaaagcctgttgaagagagtattattagacctcttttt
gacaatttaactccttattatcctactgaaaaaattaatcttgagtataatccagcagat
tactcaacaagagtgatggatttactcactcctgttggaaagggacaaagaggtttaatt
gtggctgctccaagaacaggaaaaaccatgcttcttcagtcaattgcaaaagctataaaa
aagaatcattctgaaatataccttatagttctgcttattgatgaaagacctgaagaagtt
actgactggcgcagacaggttacaggagctgaaattataagttctacctttgatgagccc
gctcagagacactgccaggtttcagaaatggtcattgaaagagcgaaaagacttgtggaa
gagggagaagatgttgtaatattacttgacagtttaacaagacttgcaagggcatacaat
gctattactccagcttcaggaaaggttctttctggtggacttgaagcaacagctttgcag
aaacctaaaagattttttggtacagcaagaaatatagaagaaggcggctctcttacaata
attgcaacagctcttgtagaaacaggaagcagaatggatgatgttatttttgaagagttt
aaaggaactggtaacatggaagttcatctggatagaaaacttgcagacaaaagaatattt
ccaagtattgatattggtgcttctggcacaagaaaagaagaactccttgttgctcctgat
gttttaaacaaagtctggattttaagaaaagttctgagtacactcagtccaattgaggca
atggaatttttattgagtaaacttaaaggaacaaaatccaataaagagtttcttgagatg
atgaataaatga
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