Thermodesulfovibrio yellowstonii: THEYE_A1134
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Entry
THEYE_A1134 CDS
T00775
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
tye
Thermodesulfovibrio yellowstonii
Pathway
tye00300
Lysine biosynthesis
tye00470
D-Amino acid metabolism
tye01100
Metabolic pathways
tye01110
Biosynthesis of secondary metabolites
tye01120
Microbial metabolism in diverse environments
tye01230
Biosynthesis of amino acids
Module
tye_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
tye00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
THEYE_A1134 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
THEYE_A1134 (dapF)
Enzymes [BR:
tye01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
THEYE_A1134 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
DUF6152
Motif
Other DBs
NCBI-ProteinID:
ACI21934
UniProt:
B5YL43
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Position
1108762..1109601
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AA seq
279 aa
AA seq
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MEKINFVKMHGLGNDFILIDCLKNDLPKPQEFAIHYCNRRFGIGADQLLLLYPSQIADFK
MKIFNADGSEVEMCGNGIRCFAKYIWDRGLSNKDVLEVETLAGIIKPKKVGELVQVDMGK
PEFHPNKIPVDVEGDSAFDLMLEVSGWHARINCVSMGNPHAVIFLDEEPKNFAVTKYGPL
IENHPIFPKRTNVEFAYVKNSSEIVMRVWERGAGETLACGTGACATAVAAMVKEFTNKKV
TVHLLGGDLLIEWAADGHVYMTGPAQEVFEGVVKVPQIG
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagatcaattttgtaaaaatgcatggacttggtaatgactttatattgattgat
tgtcttaaaaatgatttgccaaaacctcaagaattcgcaattcattactgtaatcgtcgt
tttggcattggtgcagatcaactcctgcttttgtatccatctcagatagcagattttaag
atgaaaatttttaatgccgacggctctgaagttgaaatgtgcggaaatggtataagatgt
tttgcaaagtacatatgggacagaggactatcaaataaagatgttcttgaggtggaaact
cttgccggaattattaagccaaagaaagttggagaacttgttcaggttgatatgggaaag
ccagagtttcatcctaataaaattccagttgatgtagaaggagactctgcctttgattta
atgcttgaagtatctggatggcatgcaagaataaactgtgtaagtatgggaaacccccat
gctgtgatattccttgatgaagagcctaaaaactttgctgttacaaaatacggaccactg
attgaaaaccatccaatttttcccaaaagaacaaatgttgaatttgcttatgtaaaaaac
tcttctgagattgtgatgcgtgtctgggaaagaggagcaggagaaactcttgcctgcggg
acaggagcctgtgctactgcagtagccgctatggttaaggaatttacaaacaaaaaagtc
actgtacatctgcttggtggagaccttttaattgaatgggctgctgatggacatgtttat
atgacaggaccagctcaggaggtttttgaaggagttgtaaaagttccacaaattggctga
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