KEGG   Thermodesulfovibrio yellowstonii: THEYE_A1342
Entry
THEYE_A1342       CDS       T00775                                 
Name
(GenBank) hydrolase, HAD superfamily
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
tye  Thermodesulfovibrio yellowstonii
Pathway
tye03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tye00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    THEYE_A1342
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tye03019]
    THEYE_A1342
Messenger RNA biogenesis [BR:tye03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     THEYE_A1342
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B PilI DUF2393
Other DBs
NCBI-ProteinID: ACI22177
UniProt: B5YFV4
LinkDB
Position
complement(1303371..1304930)
AA seq 519 aa
MEFLYIFIAIIFGAVAGYGVYLFHRSRLKEEKIKIHEEAQKILEDAKKEAETVKKEAHLS
AKEVIYQLKFEAEKEIKEKTKEINYQEKRLRQKEELLDRKIEQVEKREIELNKREKEIVS
KERILQEKENHYNKLISEQQQLLEKIAGMKEEEAKQELFKKVEQETRFEAARLIKRIEDE
VKQEADKKAKEILSLAVQRYASDYVVDATVTAVSLPNDEMKGRIIGREGRNIRAFESLTG
VDLVVDDTPELVILSSFDPIKREIARMALERLIVDGRIHPARIEEVVEKARRDVDIAIRD
EGEKAVFELGLSGIHPEIIKLIGRLKYRTSYGQNVLQHSKEVAWLSGIMAGELRVNVKLA
KRAGLLHDIGKAVDHEMEGSHQEIGAMLAKKYGEGEEVINAILSHHEDVEFSCVESALVA
AADALSAARPGVRRETIESYIKRLTKLEELAMSFQGVQNCYAIQAGREVRLIVRPDIVTD
EECAFIARELSRRIEKELSYPGQIKVTVIRESRFIEYAK
NT seq 1560 nt   +upstreamnt  +downstreamnt
atggagtttttatatatttttattgcaattatcttcggtgctgttgctggatatggagtt
tatcttttccataggagcaggcttaaagaggaaaagataaaaattcatgaagaagctcaa
aaaattcttgaagatgcaaaaaaggaagcagagacagtaaaaaaagaagcacatctttca
gcaaaagaagtcatataccaattaaaatttgaagcagaaaaagaaataaaggaaaaaaca
aaggagattaattatcaggaaaaaaggctaagacagaaggaagagcttttagaccgaaaa
attgagcaggtagaaaaaagggagattgaactaaataaaagagaaaaagagatagtttca
aaggaaagaattttacaggaaaaagaaaatcattataataagcttatttcggaacaacaa
cagcttcttgaaaaaatagcaggaatgaaagaagaagaagcaaaacaggaacttttcaaa
aaagtagaacaggaaactcgttttgaggcggccagacttattaaaaggatagaagatgag
gttaaacaggaagcagacaaaaaagcgaaagaaatactaagtttggcagtacagagatat
gcaagtgattatgttgttgatgctactgttacagcggtaagtcttccaaatgatgaaatg
aaaggaagaataataggcagagagggcagaaacataagagcttttgaatcattaacaggt
gttgaccttgttgttgatgatacaccagaacttgttattctttcctcttttgatccaata
aagagagagattgcaagaatggcactggaaagattaattgttgatggaagaattcatcca
gcaagaatagaagaagttgtggaaaaggctcgtagagatgtagatattgccataagggat
gaaggagaaaaagcagtatttgaacttggactgagcggaattcacccagagattataaaa
cttataggcaggttaaaatatagaacctcttacggacagaatgttttacaacactcaaaa
gaagtagcatggcttagtggaattatggcaggtgaactcagagttaatgtaaagcttgcc
aagagagcaggacttctgcatgatataggaaaagcagttgaccatgaaatggaaggctct
catcaggaaataggtgctatgcttgcaaaaaaatatggtgaaggcgaagaagttataaat
gcaattctcagtcatcatgaagatgtggagtttagttgtgttgagtccgcattggttgcg
gcagcagatgctctttctgcagctcgtcctggggtaagaagagaaaccatagaaagttat
attaagagacttacaaaacttgaagaacttgccatgtcttttcagggagttcaaaactgt
tatgcaattcaggcaggaagagaagttagacttattgtaagacctgatattgtaactgat
gaagaatgtgcttttattgcaagagaattaagtagaaggatagaaaaggagttaagttat
cctggacagattaaagtaactgtaataagagagtcaagattcatagaatatgcaaagtaa

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