Thermodesulfovibrio yellowstonii: THEYE_A1342
Help
Entry
THEYE_A1342 CDS
T00775
Name
(GenBank) hydrolase, HAD superfamily
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
tye
Thermodesulfovibrio yellowstonii
Pathway
tye03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tye00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
THEYE_A1342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tye03019
]
THEYE_A1342
Messenger RNA biogenesis [BR:
tye03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
THEYE_A1342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
PilI
DUF2393
Motif
Other DBs
NCBI-ProteinID:
ACI22177
UniProt:
B5YFV4
LinkDB
All DBs
Position
complement(1303371..1304930)
Genome browser
AA seq
519 aa
AA seq
DB search
MEFLYIFIAIIFGAVAGYGVYLFHRSRLKEEKIKIHEEAQKILEDAKKEAETVKKEAHLS
AKEVIYQLKFEAEKEIKEKTKEINYQEKRLRQKEELLDRKIEQVEKREIELNKREKEIVS
KERILQEKENHYNKLISEQQQLLEKIAGMKEEEAKQELFKKVEQETRFEAARLIKRIEDE
VKQEADKKAKEILSLAVQRYASDYVVDATVTAVSLPNDEMKGRIIGREGRNIRAFESLTG
VDLVVDDTPELVILSSFDPIKREIARMALERLIVDGRIHPARIEEVVEKARRDVDIAIRD
EGEKAVFELGLSGIHPEIIKLIGRLKYRTSYGQNVLQHSKEVAWLSGIMAGELRVNVKLA
KRAGLLHDIGKAVDHEMEGSHQEIGAMLAKKYGEGEEVINAILSHHEDVEFSCVESALVA
AADALSAARPGVRRETIESYIKRLTKLEELAMSFQGVQNCYAIQAGREVRLIVRPDIVTD
EECAFIARELSRRIEKELSYPGQIKVTVIRESRFIEYAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggagtttttatatatttttattgcaattatcttcggtgctgttgctggatatggagtt
tatcttttccataggagcaggcttaaagaggaaaagataaaaattcatgaagaagctcaa
aaaattcttgaagatgcaaaaaaggaagcagagacagtaaaaaaagaagcacatctttca
gcaaaagaagtcatataccaattaaaatttgaagcagaaaaagaaataaaggaaaaaaca
aaggagattaattatcaggaaaaaaggctaagacagaaggaagagcttttagaccgaaaa
attgagcaggtagaaaaaagggagattgaactaaataaaagagaaaaagagatagtttca
aaggaaagaattttacaggaaaaagaaaatcattataataagcttatttcggaacaacaa
cagcttcttgaaaaaatagcaggaatgaaagaagaagaagcaaaacaggaacttttcaaa
aaagtagaacaggaaactcgttttgaggcggccagacttattaaaaggatagaagatgag
gttaaacaggaagcagacaaaaaagcgaaagaaatactaagtttggcagtacagagatat
gcaagtgattatgttgttgatgctactgttacagcggtaagtcttccaaatgatgaaatg
aaaggaagaataataggcagagagggcagaaacataagagcttttgaatcattaacaggt
gttgaccttgttgttgatgatacaccagaacttgttattctttcctcttttgatccaata
aagagagagattgcaagaatggcactggaaagattaattgttgatggaagaattcatcca
gcaagaatagaagaagttgtggaaaaggctcgtagagatgtagatattgccataagggat
gaaggagaaaaagcagtatttgaacttggactgagcggaattcacccagagattataaaa
cttataggcaggttaaaatatagaacctcttacggacagaatgttttacaacactcaaaa
gaagtagcatggcttagtggaattatggcaggtgaactcagagttaatgtaaagcttgcc
aagagagcaggacttctgcatgatataggaaaagcagttgaccatgaaatggaaggctct
catcaggaaataggtgctatgcttgcaaaaaaatatggtgaaggcgaagaagttataaat
gcaattctcagtcatcatgaagatgtggagtttagttgtgttgagtccgcattggttgcg
gcagcagatgctctttctgcagctcgtcctggggtaagaagagaaaccatagaaagttat
attaagagacttacaaaacttgaagaacttgccatgtcttttcagggagttcaaaactgt
tatgcaattcaggcaggaagagaagttagacttattgtaagacctgatattgtaactgat
gaagaatgtgcttttattgcaagagaattaagtagaaggatagaaaaggagttaagttat
cctggacagattaaagtaactgtaataagagagtcaagattcatagaatatgcaaagtaa
DBGET
integrated database retrieval system