Thermodesulfovibrio yellowstonii: THEYE_A1872
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Entry
THEYE_A1872 CDS
T00775
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tye
Thermodesulfovibrio yellowstonii
Pathway
tye03420
Nucleotide excision repair
tye03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tye00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
THEYE_A1872
03430 Mismatch repair
THEYE_A1872
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tye03400
]
THEYE_A1872
Enzymes [BR:
tye01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
THEYE_A1872
DNA repair and recombination proteins [BR:
tye03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
THEYE_A1872
MMR (mismatch excision repair)
Other MMR factors
THEYE_A1872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
Mei5_like
DUF3553
DUF5770
Motif
Other DBs
NCBI-ProteinID:
ACI21683
UniProt:
B5YHS6
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All DBs
Position
1794902..1797001
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AA seq
699 aa
AA seq
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MKDFPLRDLNPAQQEAVVYCEGPLLVLAGAGSGKTRVITYKYAYLTKSKGLLPSSIFTVT
FTNKAADEMKERIFKMCNGNWKNTWIGTFHSLCVRILRAHIDNIGYKRDFIIYDDDDQAG
LIKRILKDLNMHEALCKCVVTKISNLKSNLITPEDYISNIEGYEFEERLGRIYMRYQNEL
KRYNALDFDDLILCVIKLFNENEDLLRRYSEQFKYILVDEFQDTNKSQYMLLQLLCRYHK
NICAVGDDDQSIYKFRGANIHNILNFEKDFPDTKIVKLEQNYRSTKHIILASSAMISRNT
MRKPKILWTERDWGEKIFYCQLNNEEEEAKYIAKNIKELYLKGDYEYKDFAILYRLVLQA
RALEEALRMEGIPYQVISGVSFYHRKEIKDVLAYMRFILNKEDNVSLMRIINTPPRGIGA
SAISKIESEAKKYMISTFEAIKRIIKEDTVSATLKEKLVSFVTLIDELSEKDYKDAASMI
KDILNFTGYLEEIEEDRIQNVLEFLSSAEKMPVREFLDKVALFSNVDTWENKKNYVSLLT
LHAAKGLEFPVVFIAGCEEGILPYFKALEDPFELQEERRLFYVGMTRAKNLLFITSVKQR
KLYSKVQKQETSSFIKDIPPEYCICIRKDYSTFAPNKKEPETSKIKPPFVIGCKVKHPTW
GVGVVRDCYGEGDDLKVIVNFPGIGIKKLAPKIVNLERV
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatttccccttaagggatttgaatcccgcccaacaagaagcagtggtttattgc
gaaggtccacttcttgtactcgcaggtgcaggaagtggaaaaacaagggtcattacttat
aagtatgcctaccttaccaaatcaaagggacttcttccatcgtcaatcttcactgtaact
tttacgaataaggcagctgatgagatgaaagaaagaattttcaaaatgtgtaatggaaac
tggaaaaatacatggattgggacatttcattctctttgtgtcaggattttaagagcccat
attgacaacatcggttataaaagagattttatcatctatgatgacgatgatcaggcagga
cttataaaaagaattttaaaagacttaaacatgcatgaagctttatgtaaatgcgttgtc
acaaaaataagcaacttgaaatcaaatttgattactcctgaagactatatttcaaatatt
gaaggttatgagtttgaagaaagactcggtagaatatatatgcgatatcagaatgaactc
aaaagatataatgctcttgattttgatgatctaatcctctgtgtaataaaactatttaat
gagaatgaagatttactgaggcgatattctgagcaatttaagtatattcttgtggacgaa
tttcaggatacaaataaatctcagtatatgcttttacagttactttgcagatatcataaa
aatatctgtgctgttggtgatgatgaccagagtatttataaattcagaggtgcgaatatc
cataatatactaaattttgaaaaagactttcctgatacaaaaatagttaaacttgaacaa
aactatcgttctacaaaacatattattctcgcttcctctgcgatgatttcaaggaataca
atgagaaaaccaaaaattctctggacagaaagagattggggagaaaaaattttctactgt
cagttaaataacgaagaagaagaagcaaaatacatagcaaagaatatcaaagaactatat
cttaaaggagattatgaatataaagattttgctattctttacaggttggttcttcaggca
agagctttagaagaagctttgcgaatggaaggaattccttatcaggttataagtggagtt
agcttttatcatcgtaaagaaataaaggatgtgcttgcttatatgcgttttattttaaat
aaagaagacaatgtaagtcttatgagaatcatcaatactcctccaagagggattggagca
tcagcaatatcaaaaattgaatccgaagcaaaaaagtatatgatatcaacctttgaggca
ataaaaagaataataaaggaagatactgtttcagctactttaaaggaaaagcttgtatct
tttgtaacattgatagatgagctttcagaaaaagactataaagatgctgcctctatgatc
aaagatatattgaatttcacaggatatcttgaagaaattgaagaagacagaatccagaat
gttttagagtttctgtcttctgctgaaaaaatgcctgttagagaatttcttgacaaagtt
gctcttttttcaaatgtagatacatgggaaaacaaaaaaaactatgtctctcttcttact
cttcatgcagcaaaaggacttgagtttcctgttgtttttatagcaggctgtgaggaagga
attttaccatactttaaagcacttgaagatccttttgaattacaggaagaaagaagactg
ttttatgtaggaatgacaagagctaaaaatcttctgtttattacaagtgtaaagcagaga
aagctttactcaaaagttcaaaaacaggagacatcaagctttattaaagatattccacct
gaatactgtatatgtataagaaaagattactcaacctttgctcctaataaaaaagaacca
gaaacttctaaaattaaacctccatttgtaataggatgtaaggttaaacatcctacttgg
ggtgttggtgttgtgagagactgttatggagaaggagatgatttaaaggttattgttaac
tttcctggtataggaattaaaaaattagcgccaaaaattgtaaacttagagagggtctaa
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