Thiomicrolovo zhangzhouensis: WCX18_01235
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Entry
WCX18_01235 CDS
T11199
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
tzh Thiomicrolovo zhangzhouensis
Pathway
tzh00300
Lysine biosynthesis
tzh00470
D-Amino acid metabolism
tzh01100
Metabolic pathways
tzh01110
Biosynthesis of secondary metabolites
tzh01120
Microbial metabolism in diverse environments
tzh01230
Biosynthesis of amino acids
Module
tzh_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
tzh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
WCX18_01235 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
WCX18_01235 (dapF)
Enzymes [BR:
tzh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
WCX18_01235 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
DUF4926
Motif
Other DBs
NCBI-ProteinID:
XAU00522
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Position
238982..239731
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AA seq
249 aa
AA seq
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MMIAKYSASGNDFVLFHSFIARDRSELARTLCDRQNGVGADGLIVLVPHAEHDFEWQFYN
SDGSTAEMCGNGSRACAHYAYTNGLAPANMTFLTEAGVIGAEVEGDMVQSDLTPPKILRE
DIVAGGKKWWLLDTGVPHLVTFDADMENFDLAEARALRFEHNANVNIASVNSDGSIRVRT
YERGVEDETLACGTGMAACFYRANREELVGDKAEVYPKSGETLYLGLEEGTITFKGLVKK
TFETVLDVK
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgatgatcgccaaatacagcgccagcggtaacgactttgtcctctttcacagctttatt
gcaagagaccgctctgaactggcacgcaccctctgcgaccgtcagaacggtgtcggggct
gacggcctgatcgtcctcgtgccgcacgcggagcacgacttcgagtggcagttctacaac
agcgacggctcgacggcggagatgtgcggcaacggcagccgcgcctgtgcacactacgcc
tatactaacggcctggcaccggcgaacatgacctttctgaccgaggcgggcgtcatcggc
gccgaggtggaaggcgacatggtgcagagcgatctgaccccgccgaagattctccgcgag
gacatcgtcgcgggcgggaaaaagtggtggctgctcgatacgggcgtgccccacctcgtc
accttcgatgccgacatggagaacttcgaccttgcggaggcgcgtgcgctgcgctttgaa
cacaacgccaacgtcaacatcgcctctgtcaacagcgacggctccatccgggtacggacc
tatgagcgcggcgtcgaggacgagacgctcgcctgcgggacggggatggcggcctgtttc
taccgcgccaaccgtgaagaacttgtcggcgacaaagcggaggtctacccgaaaagcgga
gagacgctctatcttgggctggaagaggggacgatcaccttcaaagggctcgtgaaaaag
acttttgagacggttttagacgttaaatag
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