Thiomicrolovo zhangzhouensis: WCX18_01780
Help
Entry
WCX18_01780 CDS
T11199
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tzh Thiomicrolovo zhangzhouensis
Brite
KEGG Orthology (KO) [BR:
tzh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tzh03032
]
WCX18_01780 (topA)
03400 DNA repair and recombination proteins [BR:
tzh03400
]
WCX18_01780 (topA)
Enzymes [BR:
tzh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
WCX18_01780 (topA)
DNA replication proteins [BR:
tzh03032
]
Prokaryotic type
DNA Topoisomerases
WCX18_01780 (topA)
DNA repair and recombination proteins [BR:
tzh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
WCX18_01780 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
DNA_ligase_ZBD
Zn_ribbon_recom
Toprim_3
Toprim_2
DUF7129
Motif
Other DBs
NCBI-ProteinID:
XAU00629
LinkDB
All DBs
Position
complement(342252..344477)
Genome browser
AA seq
741 aa
AA seq
DB search
MKLIIVESPAKARTIKNFLGKGYEVIASKGHIRDLPKSRFGIKVDEEARTLTPEYSVSKE
NAPTVKQIQDLAKKADEIYIATDEDREGEAIGWHIAHAIKKDPAALPRIVFHEITKTAIE
HALETARAIDMDRVNAQQTRRLLDRIVGYKLSPLLSSKIQKGLSGGRVQSSTLKIIVDRE
REIKAFKPEEYWTIDTVFTPGIDASLYSYDGEKLDKLSIKNQAQAEAMTERIRGEAFSVS
AIETKQRKTSTPPPFMTSTLQQTASSKLGFSPKKTMMLAQTLYEGVKTPSGTSGVITYMR
TDSLNMAKEAVEAARDTIVKTYGEKYLPKSPKAYGKKAKGAQEAHEAIRPTMLDFTPQVA
AQYLKPDELKLYRLIYTRFLACQMTDALFEQQSITFQSDSAEYKATGRKLLFDGFYKVLG
TDDKDKLLPALEEGQRIALESIAPTQHFTEPPSRYSEASLIKKLEAEGIGRPSTYAPTIS
TLQARSYIDIEKRQIVPTEVAFTVTELLEKHFPEIVDANFTANMEEILDKIADEHHDWQN
VLVDFYFPFMEEITKGKTEIKSLKMAEPIGRNCPECGSELLMRSGRYGKFIACSGFPKCK
YTEQVAEEGAPAKQAPEAETTDEICDKCGSPMVIKSGRNGKFLACSSYPKCKNTRPLEAP
KAATVPCPDCGGKLLFRQSRRGAFWGCENYPTCKFISKFEPTDKKCDQEGCDGVLARRTY
RGKEVYECVKCKHRTPIEEEA
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
ttgaaactgattatcgtagagtccccggccaaggcaagaaccatcaagaacttcctcgga
aaagggtacgaagtcatcgcttccaaggggcatatccgcgacctccccaaaagccgcttc
ggcatcaaggtcgacgaggaggcacgcacgctcacccctgaatacagcgtctccaaggag
aatgcgcccacggtcaaacagatccaggatctggccaagaaagcggatgaaatctacatc
gcgaccgatgaggaccgcgaaggagaagcgatcggatggcacatcgcccatgcgatcaaa
aaagaccctgccgccctgccgcgcatcgtcttccacgagattaccaaaaccgctatcgag
cacgccctggagacggcccgcgccatcgacatggaccgcgtcaacgcccagcagacccgc
cgtctgctcgaccgtatcgtcggttacaagctctccccgctgctgagctccaagatccag
aaggggctctccggcggccgcgtccagtcttcgacactcaagatcatcgtcgaccgcgaa
cgggaaatcaaggcctttaaacccgaagagtactggaccatcgatacggttttcacccct
ggcatcgacgccagcctctacagctacgatggtgaaaagctcgacaaactctccatcaag
aaccaggcccaggccgaagcgatgaccgagcgcatccgcggcgaggccttcagcgtcagc
gcgatcgaaaccaagcagcgcaaaacctccacgccgccgccattcatgacctcgaccctg
cagcagacggcctcgagcaagctcggcttctctccgaaaaagacgatgatgctggcccag
accctctacgaaggagtcaaaacccccagcggcacctccggggtcatcacctatatgcgt
acggactctctcaatatggccaaagaggccgtcgaagcggcccgcgacaccatcgtgaag
acctacggcgaaaagtaccttccgaaatcccccaaagcctacggcaaaaaggcaaagggg
gcccaggaagcccacgaagcaatccgcccgacgatgctcgatttcaccccgcaggtcgcg
gcccagtacctcaaacccgacgaactgaagctctaccgcctcatctacacccgcttcctc
gcctgccagatgaccgatgcgctcttcgagcagcagtccatcaccttccaaagcgatagc
gccgagtacaaggcgacgggccgcaaactcctctttgacggcttttacaaagtcctcggt
accgatgacaaggacaaactgctgccggccctcgaagaggggcagaggatcgccctcgag
tcgatcgcgccgacgcagcactttaccgagccgccgtcacgctactccgaagcgagcctg
atcaagaagctcgaagccgaagggatcggccgtccgtcgacctacgccccgacgatctcg
acgctccaggcgcgcagctatatcgacatcgaaaaacgccagatcgtcccgaccgaggtc
gcctttaccgtcaccgaactgctggagaagcacttcccggagatcgtcgacgcgaacttt
accgcgaacatggaggagatcctcgacaagatcgccgacgaacaccatgactggcagaac
gtcctcgtcgacttctacttccccttcatggaggagatcaccaagggcaaaacggagatc
aagagcctcaagatggcggagccgatcggccgcaactgccccgaatgcggttcggaactg
ctgatgcgctcgggccgttacggcaaattcatcgcctgcagcggctttccgaagtgtaaa
tacaccgagcaggttgccgaagagggtgcacctgccaagcaggcaccggaagcggaaacg
accgatgagatctgcgacaagtgcggcagcccgatggtcatcaaaagcggccgtaacggc
aagttcctcgcctgcagctcctatccgaaatgcaaaaacacccgtcccctcgaagccccg
aaagcagcaacggtcccctgcccggactgcggcggcaaactgctcttccgccagtcgcgc
cgcggggcgttctggggctgtgagaactaccctacctgcaaattcatctcgaagttcgag
ccgacggacaagaagtgcgaccaggaggggtgcgacggcgtccttgcccgccgtacctac
cgcggcaaagaggtctatgagtgcgtcaagtgcaagcaccgcaccccgatcgaggaagag
gcgtga
DBGET
integrated database retrieval system
