Thiomicrolovo zhangzhouensis: WCX18_02870
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Entry
WCX18_02870 CDS
T11199
Name
(GenBank) AAA family ATPase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
tzh Thiomicrolovo zhangzhouensis
Pathway
tzh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tzh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
WCX18_02870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tzh03400
]
WCX18_02870
Enzymes [BR:
tzh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
WCX18_02870
DNA repair and recombination proteins [BR:
tzh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
WCX18_02870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
UvrD_C_2
Viral_helicase1
SH3_13
AAA_11
PIF1
AAA_16
AAA_22
OB_YrrC
AAA
HHH_5
Helicase_RecD
Mg_chelatase
AAA_5
TraI_hel_assoc_N
NPHP3_N
UvrD_C
nSTAND3
ABC_tran
DUF87
AAA_18
AAA_24
Motif
Other DBs
NCBI-ProteinID:
XAU00833
LinkDB
All DBs
Position
564790..567018
Genome browser
AA seq
742 aa
AA seq
DB search
MKLIGQIEKIFYEDEGFFVGVLGSGEKISGHYFESSVASIENAAVTLEGEYVEHPKYGRT
FKFHTLNVNQHELFFFLNRVVKGFPKKVTAELIERFGEAGLIDILDNDIEKLTEFAGIKQ
KRVERIQGRWKQFRSMRELGSLLAPFDVTPAMLTTIAGAMKEVRDPVAAIRKNPYILTNV
EGIGFRRADELALKMGVETGDERRLACAMEYAIAQRCERDGNSCVGKEELFAELDTLLQE
GAVPQRYEAVLAEHVAEESIRPLNGELLSPVRLYEAERFLYEEFRRRAKRDDTPLTEDLD
TFLAEAAFVPGEQQREALETLNRGKRLFCLVGYAGTGKSTTAKLLLDLLALRHGREQVIT
CALSGIASQRIGEVSGYESATIQSLLVRFEERDSMPYKVVLIDEASMINAPLFARLLSKC
HRDAALIIVGDDAQLPPIGAGDVLGDIIRFKLMPVVTLTKIYRQSETQAIPAIADAVRHS
EIPALYGEYEDFRFLPIASRDFPDRGTHAEALLAALAEQAVNAIPACREHLKQKELYAYL
TAFQVISPMKGGTLGTENLNRVLQGYFNPSPRQTVQRGERRFALMDKVVHTKNDNLPSWS
LQEYKAEAPSEKRRIFNGMLGLLFRIDEEAEQVYVVYPLEEMVACYDYTQLTSHLMLAYA
LTVHKVQGMEYRSIAMPLTFSHYAMLDRKLLYTAITRAKEHCFIAGESDGFARALLRGDT
VSRRTVLQYLADGASKIPGSGE
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgatcggccagatcgagaagatcttttacgaggacgaaggcttcttcgtcggc
gtgctcggttcgggcgagaagatcagcggccactactttgagagcagtgtcgccagcatc
gaaaacgcggccgtcacccttgaaggcgagtatgtcgaacaccccaaatacgggcgtacc
ttcaaatttcacaccctcaacgtcaaccagcatgaacttttctttttcctcaaccgtgtc
gtcaaaggcttcccgaaaaaggtgaccgcagaactgattgagcgtttcggagaagcgggc
ctgatcgacatcctcgacaacgacatcgaaaaactgacagaattcgcaggcataaaacag
aaacgggtggagcggatccagggccgctggaaacagttccgctctatgcgtgaactggga
agcctattggctccctttgacgttacccccgccatgctgacgacgatcgcgggtgcgatg
aaagaggtcagagaccctgtcgcggcgatccggaaaaatccctatatcctgaccaacgtg
gaggggatcggtttccggcgtgccgatgaactggccctgaagatgggggtggagaccgga
gatgagcggcgtctggcctgtgccatggaatacgcgatagcacagcgttgcgaacgcgac
ggcaacagctgtgtaggcaaagaggaactcttcgccgaactggataccctattgcaggaa
ggtgccgtaccgcagcgttatgaggcggtactggcggagcatgttgcggaggagtcgatc
cgcccgctgaacggcgagctactctcgccggtgcggctctatgaggcagagcgttttctc
tacgaagagttccgtcggcgagcgaaacgcgatgacacccctttgaccgaagatctcgat
acttttttggcggaggcggcatttgtaccgggagagcagcagcgcgaagcgcttgagacg
ctgaaccggggaaaacggctcttctgtctggtcggttatgccgggacgggtaagagcacg
acggcaaaactgttgctggacctcctggccctgcggcacggacgtgaacaggtgatcacc
tgtgcgctcagcggcatcgcgtcccagcgcatcggggaggtgagcggctatgagagtgcg
acgatccagagcctgctggtgcgcttcgaagagcgcgacagcatgccctacaaggtcgtg
ctcatcgacgaagcctccatgatcaatgcaccgctctttgcccggctgctcagcaaatgc
caccgggatgcggcacttatcatcgtcggcgacgatgcacagctgccgccgatcggcgcc
ggggacgtgctcggcgacatcatccgtttcaaactgatgccggtggtgaccttgacgaag
atctaccgtcaaagcgagacacaggcgatcccggccatcgccgatgcggtacgccacagc
gagatccccgcactctacggggagtatgaagacttccgcttcctgccgatcgcttcacgc
gactttcccgaccgtggaacccatgccgaggcgctgttggcggcgttggcagagcaggcg
gtgaatgcgatccccgcgtgccgcgagcatctgaaacaaaaagagctgtatgcctacctg
acggccttccaggtgatcagcccgatgaagggagggacgctcggtaccgagaacctcaac
cgggtactgcagggctatttcaacccctccccccgccagaccgtccagcgcggcgagcgc
cgcttcgcactcatggataaggtggtccatacgaaaaacgacaacttgccttcttggagc
cttcaggagtacaaagcagaggcgccttcggagaaacgccgtattttcaacgggatgctg
gggctgctcttccggatcgacgaagaggcggagcaggtctatgtcgtgtaccctcttgag
gagatggtcgcctgctacgactatacgcagctgacttcgcacctgatgctggcctatgcc
ctgaccgtgcacaaagtccaggggatggagtaccgcagcatcgcgatgccgctgaccttc
agccattacgccatgctggatcggaagctgctttatacggcgatcacccgtgcaaaagag
cactgcttcatcgccggcgagtccgacgggtttgcccgtgcgctgctgcgcggcgatacc
gtgtcacgccgtacggttctgcagtacctggcagatggggcttcaaagattccgggctcg
ggagaatga
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