Thiomicrolovo zhangzhouensis: WCX18_03885
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Entry
WCX18_03885 CDS
T11199
Name
(GenBank) HNH endonuclease
KO
K03555
DNA mismatch repair protein MutS
Organism
tzh Thiomicrolovo zhangzhouensis
Pathway
tzh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tzh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
WCX18_03885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tzh03400
]
WCX18_03885
DNA repair and recombination proteins [BR:
tzh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
WCX18_03885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
DUF968
HNHc_6
HNH_2
MutS_II
AAA_21
AAA_16
Motif
Other DBs
NCBI-ProteinID:
XAU01031
LinkDB
All DBs
Position
767960..771034
Genome browser
AA seq
1024 aa
AA seq
DB search
MLHSEIDGILNSKDRLLTEVYFDLQRRFEEKYGSDTVVFMEIGTFYEVYEVNNDDMQVGK
AKEMAELLNIQLTKKNKNIAENSVKNPFLAGVPSVSFERYLGRLIQEQRYTIIVIRQKGV
PPKLSRFIGQIISPGTNFDHTVDNDDNYIVSLLIDRHKDIYSVGYAAIDVTTGKTWLYET
YGTSEDPTYALDEVFNLLNIYRTTEVVLTFLEGVENQKEVIRYLEISEHYAYSVNHERPK
IDYQNELFENVYQIQSLLSPIEHLDLERHPFVSEALATLVHFVIEHDYHIIQKLARPKMI
DNTRYMYLGNNALEQLAVISKDRSDMTLLKLVDKSVTAIGKRLLKERLLNPIQERSELER
RYGLIDRVMPHVRMLGDALRGVYDLERLHRRIALARLHPFEMNYVHASLVGIRELMEFVK
RHKLIKTPFSEQEVDTFIRDIEQSIDLEVSRRFTVSTVDDNFLRRGVDVQVDALVDENAR
MLQNFAIIMDAMERMLGEQGAAAGSGGYVSLGVLDKEGHYISMSRTRWAMIEKEFASGSV
DLGNETVCFSDFSVKRLTNSVKITSELTEQLSDKIMRNQAKIVALVKERFIALQRTFERR
YTLLFERIIGYVADLDVAVASARAAQQYNFACPTIVDVHEDENFLQLMALRHPLIEIQER
QGIYVPNDIVMGNRAYMDLPYPETVMLDPAVHDGHDVNGVLLYGINSSGKSSLMKSVGLA
VLMAQAGFYVPASSMKFSLFESLFTRIVSRDNLQKGLSTFAVEMMELKNIFNRAGTRSLI
LGDEISHGTETLSGVAIVASAIMKLAKLRSLFLFATHLHQLANMEEMRRLENVVDLHLSV
EYDAVKDKLVFNRVLQSGSGSSVYGLEFARSLHMDSEFLEAANRIRKRLSNDFDELELLV
KKRTSKYNKDLYVTTCVICGAKAEDVHHIAHQSSADARGFIGHVPVNHRHNLVPLCRDHH
REIHEGKLVVKGFVMTSSGLELDVEEQLARVQVVKEEVPEINTVDLPEHEPEAPRKASID
MDDF
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
gtgctacacagcgagattgatgggattctcaacagcaaagaccgcctgctgacagaggtc
tatttcgacctgcagcgccgtttcgaagagaagtacggcagcgatacggtcgtctttatg
gagatcggcaccttttacgaagtctacgaggtcaacaatgacgacatgcaggtgggcaag
gccaaggagatggccgaactgctcaacatccagctgaccaagaaaaacaagaacattgcc
gaaaacagcgtcaagaacccctttcttgccggggtgccttccgtctcgttcgagcgctac
ctgggccgcctgatccaggagcagcgctatacgatcatcgtcatccgccagaagggggtg
ccgccgaagctcagtcgcttcatcgggcagatcatctccccgggcacgaacttcgaccat
accgttgacaacgacgacaactacatcgtctccctgctgatcgaccgccacaaagatatc
tacagcgtcggctatgcggccatcgacgtgacgacggggaaaacctggctctacgagacc
tacggcacgagcgaagaccccacctatgcgctggacgaggtcttcaacctgctcaacatc
tatcggacgacagaggtggtactgaccttcttggagggggtggagaaccagaaagaggtg
atccgctacctggagatcagcgagcactacgcctacagcgtcaaccacgaacgcccgaag
atcgattaccagaacgaactctttgaaaacgtctaccagatccagtctctactgtcgccg
atcgaacacctcgacctggagcgccaccccttcgtctccgaagcgctggcgacgctggtg
cacttcgtcatcgaacacgactaccacatcatccagaagcttgcccggccgaagatgatc
gacaatacgcgctacatgtacctgggcaacaatgcattggaacagctggccgtcatctcc
aaagaccgcagcgacatgacactgctcaaactcgtcgacaagagcgtgacggcgatcggc
aagcgcctgctcaaggagcgcctgctcaaccccatccaggagcgcagcgagctggagcgc
cgctacgggctgatcgaccgggtgatgccgcacgtgcggatgctcggcgatgcccttcgg
ggggtctacgacctcgagcgtctccaccgccggatcgccctggcacgcctgcaccccttc
gagatgaactatgtccacgcctcgcttgtcggcatccgggaactgatggagttcgtcaaa
cggcacaagctcatcaagacccccttcagcgagcaggaggtcgacacttttatccgcgac
atcgagcagagcatcgacctggaggtgtcgcgccgttttaccgtcagcaccgttgacgac
aacttcctgcgccggggtgtcgacgtgcaggtggacgcactggtggacgaaaacgcccgg
atgctgcagaatttcgcgatcatcatggacgcgatggaacggatgctcggcgagcagggg
gcggctgcggggagcggcggctatgtctccctgggggtcctggacaaggaggggcactac
atctccatgagccggacccgctgggcgatgatcgaaaaggagttcgcctccggcagcgtc
gacctgggaaacgagacggtctgtttcagcgacttcagcgtcaagcggctcaccaacagt
gtcaagatcacctcggagctgaccgaacagctctccgacaagatcatgcgcaaccaggcg
aagatcgtcgccctggtcaaggagcgtttcatcgccctgcagcgcaccttcgagcggcgc
tatacgctcctgttcgagcgcatcatcggctacgtggccgacctcgacgtggccgtcgcc
tccgcgcgggcggcgcagcagtacaactttgcctgcccgaccatcgtcgatgtccatgag
gacgagaacttcctgcagctcatggcgctgcgccacccgctcatcgagatccaggagcgg
caggggatctacgtgcccaacgacattgtcatgggcaaccgcgcctacatggatcttccc
tatcccgaaacggtcatgcttgatcccgccgtgcacgacggccatgatgtcaacggcgtc
ctgctctacggtatcaactccagcgggaaatcctcgctgatgaagagcgtcgggctggcg
gtgctgatggcacaagccggtttttacgtaccggcgtcgtcgatgaagttctcgctcttt
gagtcgctctttacccggatcgtctcccgcgacaacctgcaaaaggggctctccaccttt
gccgtcgagatgatggaactcaagaacatcttcaaccgcgccgggacacggtcgctgatc
ctcggcgacgaaatctcgcacgggacggagacgctctccggcgtcgccatcgtcgcgagc
gcgatcatgaaactggcgaaactgcgctcccttttcctcttcgccacccacctgcaccag
ctggccaacatggaggagatgcggcggctggagaatgtcgtcgacctgcacctgagcgtg
gagtatgatgcggtcaaagacaagcttgtctttaaccgcgtgctgcagtcgggcagcggt
tcgagcgtctacggcctggagttcgcccgctccctgcacatggactcggagtttctggag
gcggcgaaccggatccgcaagcgcctctccaacgactttgacgaactggagctgctggtg
aaaaagcgcaccagcaagtacaacaaggacctctacgtcaccacctgtgtcatctgcggg
gcgaaggcggaagatgtgcaccatatcgcgcaccagtccagtgcggatgcccgcgggttc
atcggccatgtgcccgtcaaccaccgccacaatctcgttcccctctgccgtgaccatcac
cgggagatccatgagggcaagctcgttgtcaaaggcttcgtgatgacctccagcgggctg
gagcttgacgtcgaggagcagctggccagagtgcaggtcgtcaaagaggaggtcccggag
atcaacacggtcgacctgccagagcacgagcccgaagcgccgcggaaagcctccatcgac
atggacgatttctag
DBGET
integrated database retrieval system
