Thiomicrolovo zhangzhouensis: WCX18_04055
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Entry
WCX18_04055 CDS
T11199
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
tzh Thiomicrolovo zhangzhouensis
Brite
KEGG Orthology (KO) [BR:
tzh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tzh03009
]
WCX18_04055 (dbpA)
Enzymes [BR:
tzh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
WCX18_04055 (dbpA)
Ribosome biogenesis [BR:
tzh03009
]
Prokaryotic type
rRNA helicases
WCX18_04055 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Citrus_P18
Motif
Other DBs
NCBI-ProteinID:
XAU01065
LinkDB
All DBs
Position
complement(796268..797647)
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AA seq
459 aa
AA seq
DB search
MTSKPFTTLPLPAPLLENLDTLGYRRMTPVQEQSLPALLEGKDAIVRAQTGSGKTLAFGI
GMIMKLAENETDVQGLVLCPTRELAEQVAGELRRLARHRPNVKVLTLCGGVPLAPQRDSL
TYGAHIVVGTPGRILDHLGKKTLSLSKVHTLVLDEADRMLDLGFHDAIMQIASHLPSSRQ
SLLFSATFPGTIAAIASALLRDPVTVEVENSATEVTLTQHFVRVKGEKSATFLRLLGHYT
PESAVVFCNTKAGCDALALELAEQGYDAAVLHGDLRQGERTEVLTRFALGGIRLLIATDV
AARGLDIKELGAVINFDLPEKPETYLHRIGRTARAGSTGMALTLFTPKQQSAAERLAAVG
DIPFVPEDASGFAPADPALLLPRFAVLRIDGGRKQKLRPGDLLGALCASGDIDGQSVGSI
AIHDTLAYVAVEQGVADSALQQLNRGKIKGKKFRARITP
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
gtgacttccaaaccttttaccacccttccccttcccgccccgctgctcgaaaacctggac
accctcggctaccgccgtatgaccccggtacaggaacaaagccttccggcgctgctcgag
ggcaaagacgccatcgtccgcgcgcagaccggcagcggcaaaaccctggccttcgggatc
ggcatgatcatgaagctcgcagagaacgaaacggatgttcagggacttgtcctctgtccg
acgcgggaactggccgaacaggtcgccggggagctgcgccgcctcgcgcgccaccggccg
aacgtcaaggtactgacgctctgcggcggggtgccgctggcgccgcagcgcgactcgctc
acgtacggcgcacacatcgtcgtaggcaccccggggcggatcctcgaccacctgggcaaa
aagacgctctcgctttcgaaagtgcataccctggtgctcgacgaggccgacaggatgctg
gacctcggttttcatgacgccatcatgcagatcgcctcgcacctcccctcctcccgtcaa
agcttgctcttttcggccaccttccccgggacgatcgccgcgatcgcttccgcgctgctg
cgcgatcctgtgacggtggaggtcgagaacagtgctacggaggtgacgctcacacagcac
ttcgtcagggttaaaggggaaaagagcgctacgtttctgcgtctcctcgggcactacact
cccgaatccgccgtcgtgttctgcaatacgaaggcgggctgcgatgcgttggcgctcgaa
cttgccgagcagggctacgatgcggccgtcctgcacggcgacctgcgccagggcgaacgc
accgaggtgctgacgcgtttcgccctcggagggattcggctgctcatcgcaacggacgtc
gccgcaagggggctcgatatcaaggagctgggcgccgtcatcaatttcgacctgcccgaa
aaacccgaaacctacctccaccgcatcgggcgtacggcccgggcgggcagcaccgggatg
gcgctgacgctcttcaccccgaagcagcagagtgccgccgaacggctggccgcagtcggc
gacattcccttcgtccctgaagacgcttccggtttcgcgccggccgatcccgcactgctg
cttccccgtttcgccgtcctgcggattgacggcggccggaaacagaagctgcgtcccggg
gacctgctcggcgccctctgcgcctccggcgacatcgacggccagtcggtagggagcatc
gccatccatgacacccttgcctacgttgccgtcgaacagggtgttgccgacagtgcgctg
cagcagctgaaccgcggcaagatcaaaggcaaaaagttccgcgccaggatcacgccgtga
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