Thiomicrolovo zhangzhouensis: WCX18_09155
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Entry
WCX18_09155 CDS
T11199
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
tzh Thiomicrolovo zhangzhouensis
Pathway
tzh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tzh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WCX18_09155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tzh03019
]
WCX18_09155
Enzymes [BR:
tzh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
WCX18_09155
Messenger RNA biogenesis [BR:
tzh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
WCX18_09155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
UTP25_NTPase-like
AAA_22
HEM4
Gag_p24
Motif
Other DBs
NCBI-ProteinID:
XAT99576
LinkDB
All DBs
Position
complement(1773890..1775236)
Genome browser
AA seq
448 aa
AA seq
DB search
MSFSTLGLSEPLLRAVADTGYSEPTPIQAQAIPVVLSGKDLLAGAQTGTGKTAGFTLPML
QLLSQAAPSKGKRPVRALVLTPTRELAAQVGQSVETYGKHLKLNSAVIFGGVNINPQINK
LRGGVDIVVATPGRLLDHANQKNIDLSRIELLILDEADRMLDMGFIHDIKKVLKLVPKKA
QKLLFSATFSDEIKTLADGLLHSPALIEVARRNTASERVAQVVYPVKQDRKRALLSTLIT
SNGWEQILVFTRTKHGANRLCKQLISDGIPSEAIHGNKTQNARTKALAAFKAKRVRVLVA
TDIAARGIDIDQLPHVVNFELPNVPEDYVHRIGRTGRAGNEGEAVSLVCAEEAEYLRNIE
KLIKASIPQKTVEGFETRLPEKVVSSSKPKTNASGKRPARNGNERTDAKPRQGQRDKKRD
AQNDRRKEQPMRAEDVAAYLSQMKAGAR
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtcattttcaacactgggcttgtcagagcctcttttgcgtgctgtcgccgataccggc
tacagcgaacctactcccatccaggcacaggcgatccccgtcgtgctcagcgggaaagat
ctccttgccggcgcccagacgggcacgggcaaaacggcgggctttaccctgccgatgctg
cagctgctctcgcaagcggcaccctccaagggcaaacgtcccgtccgtgcactggtgttg
acgccgacacgtgaactggccgcacaggtgggacagagcgtcgaaacctacggcaaacac
ctgaagctgaactcggcggtgatcttcggcggggtcaacatcaacccgcaaatcaataaa
ctgcgcggcggcgtggacattgtcgtggcgacgccggggcgcctgctcgaccatgcgaat
cagaagaacatcgacctttcgcgcatcgagctgcttattctcgacgaggcggaccgcatg
ctcgatatggggtttattcacgacatcaagaaggtgctcaagctcgtcccgaaaaaggcg
cagaagctgctcttttccgcgaccttctccgatgagatcaagacgctggccgacggcctg
ctgcacagcccggcgctcatcgaagtcgcccgccgcaacacagcttccgagcgtgtcgca
caggtcgtctacccggtcaagcaggaccgcaagcgcgcactgctctccacgctcatcaca
tccaacggctgggagcagatcctggtcttcacgcggacgaagcacggggcgaaccgcctg
tgcaagcagctaatatctgacggcatcccatccgaggcgatccacggcaacaagacacag
aacgcacgcaccaaggcactggcggccttcaaggcgaagcgggtccgcgtcctcgtggcg
acggacatcgcggcgcgcgggatcgatattgaccagctgccgcacgtcgtcaatttcgag
ctgccgaacgtgcccgaagactacgtgcaccgcatcggccgtacggggcgcgcgggcaac
gagggcgaggccgtttcgctggtctgcgccgaagaggccgaataccttcgcaacatcgaa
aagctgatcaaggcgtcgatcccgcaaaaaacggtcgaagggttcgaaacccgtctgccc
gaaaaagtggtatcctcatccaagccgaaaacgaacgcttcgggcaaacggccggcacgc
aacggtaacgagcgtacggatgccaagccgcgccaggggcagcgtgacaaaaagcgcgac
gcacagaatgaccgccgcaaagagcagccgatgcgcgcggaagatgtcgcagcctatctc
tcgcagatgaaagcgggagcgcgctga
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