Thiomicrolovo zhangzhouensis: WCX18_11235
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Entry
WCX18_11235 CDS
T11199
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
tzh Thiomicrolovo zhangzhouensis
Pathway
tzh00541
Biosynthesis of various nucleotide sugars
tzh01100
Metabolic pathways
tzh01250
Biosynthesis of nucleotide sugars
Module
tzh_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
tzh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
WCX18_11235 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
tzh01005
]
WCX18_11235 (rfaD)
Enzymes [BR:
tzh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
WCX18_11235 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
tzh01005
]
Core region
WCX18_11235 (rfaD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
NmrA
KR
Ldh_1_N
adh_short
Motif
Other DBs
NCBI-ProteinID:
XAT99969
LinkDB
All DBs
Position
complement(2200326..2201333)
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AA seq
335 aa
AA seq
DB search
MRYIDDDLKDKTILITGGAGFIGANLAFYFQENHPGAHVVVLDSFRSGETLSNGNLKSFG
HFKNLVGFRGEVISGDINDKALLAKLEKDYDFDYIFHEAAISDTTALEQDLMIRTNLNAY
KDLLDMAVRQGANMIYASSGATYGDAPSPQRVGVEAPQNVYGFSKLMMDHLSRDYMKREK
IGIVGLRYFNVYGPREFFKNKTASMVVQFGHQILAGKNPRLFEGSDKIVRDFIYIEDIIQ
ANILAMHPKESGIYNVGTGKARSFQSIVDTLQKELGTSMPCEYIPNPFVGRYQFHTEADI
ESTKQGLGYAPRYELEDGIKAYIPEIKRLFEEEVK
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgcgctatattgatgacgacctgaaagacaagacgattctgatcacggggggcgcaggc
tttatcggtgcgaacctggccttctatttccaggagaatcacccgggtgcccatgtcgtc
gtcctcgacagcttccgcagcggcgagacgctcagcaacggcaacctcaaaagcttcggc
cacttcaagaacctggtaggcttccgcggcgaggtgatcagcggcgacatcaacgacaag
gcgctgctggccaaactggaaaaagattacgatttcgactacatcttccacgaagcggcc
atctccgacacgacggcgctggagcaggacctgatgatccgcaccaacctcaacgcctac
aaggacctcctcgacatggcggtgcgccagggggcgaacatgatctacgcctcgtcgggc
gcgacgtacggtgacgccccctcaccgcagcgcgtcggggtcgaggcgccgcagaacgtc
tacggcttctccaaactgatgatggaccacctcagccgtgactacatgaagcgcgagaag
attggcatcgtcggtttgcgctacttcaacgtctacgggccgcgggagtttttcaagaac
aagaccgcgtcgatggtcgtgcagttcggccaccagatcctcgccggcaagaacccgcgt
ctcttcgaaggctcggacaagatcgtgcgcgacttcatctatatcgaggatatcatccag
gcgaacatcctggcgatgcaccccaaggaaagcgggatctacaacgtcggtacgggcaaa
gcgcgctccttccagtccatcgtcgacacgctccaaaaagagctggggacttctatgccg
tgcgagtatatcccgaaccccttcgtcgggcgctaccagttccacaccgaggcggatatc
gagagcaccaagcaggggctgggatatgcgccgcgctatgaactcgaagacgggatcaaa
gcctatatccccgagatcaagcgcctttttgaagaagaggtcaaatga
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