Thiomicrolovo zhangzhouensis: WCX18_11925
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Entry
WCX18_11925 CDS
T11199
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tzh Thiomicrolovo zhangzhouensis
Pathway
tzh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tzh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
WCX18_11925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tzh03021
]
WCX18_11925
03400 DNA repair and recombination proteins [BR:
tzh03400
]
WCX18_11925
Enzymes [BR:
tzh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
WCX18_11925
Transcription machinery [BR:
tzh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
WCX18_11925
DNA repair and recombination proteins [BR:
tzh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
WCX18_11925
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_CTD
RNA_pol_A_bac
RNA_pol_L
RNA_pol_L_2
PASTA
HTH_54
TRAPP
Motif
Other DBs
NCBI-ProteinID:
XAU00105
LinkDB
All DBs
Position
complement(2340926..2341918)
Genome browser
AA seq
330 aa
AA seq
DB search
MKKIKTAPLLPEEFVVEQISDTEANIIAYPFETGYAVSLAHPLRRFLLSSSVGYAPIAIK
IEGAKHEFDSVRGMLEDISDFIINLKSIRFKLKNDAKEATIDYSFVGPCEIKGSDLINDN
VDVVTPDAFLATLNEDATLNFSLKIFQGIGYVPSEDIRDEVEEGYIALDAFFTPVRKATY
AIQNVLVEDNPNFEKVVLNIVTDGQISPLDAFRNALNVMHAQMAVFSSEISIQSPATIER
AEASEEIGKLTAPIEELGLSARSFNCLDRADLKYIGEIVLMSQNDLKNVKNLGKKSYDEI
VEKLEEAGFQVGQEMSDETISVLKKKIESE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagatcaaaacagctccgcttctgcccgaagagttcgtcgtcgagcagatcagc
gataccgaagcgaatatcattgcctatccgttcgagacaggttatgcggtttcactggcg
cacccgctgcgccggttcctgctgagcagctcggtaggctatgcgccgatcgcgatcaag
atcgagggagccaagcacgagttcgactccgtgcgcggtatgctcgaagatatttctgac
tttatcatcaacctcaaaagcatccgtttcaaactgaaaaacgatgccaaagaggcgacg
atcgattacagcttcgtcggaccgtgcgagatcaaaggaagcgatctgatcaatgacaac
gttgacgtcgtcacaccggacgctttcctcgcgacactgaacgaagatgcgacgctgaac
ttctcactgaagatcttccaggggatcggttacgtcccgagcgaagatatccgcgacgaa
gtcgaagagggctacatcgctctcgacgcgttctttacgccggtccgcaaagcgacctat
gcgatccagaacgtcctcgtcgaagacaacccgaactttgagaaggttgtcctcaacatc
gtcaccgatggccagatcagcccgctggacgctttccgcaatgccctgaacgtcatgcat
gcgcagatggcggttttcagcagcgaaatcagcatccagtccccggcaacgatcgagcgt
gcggaagcttccgaagagatcggcaagctgacggcaccgatcgaagagctcggcctttca
gcacgcagcttcaactgccttgaccgtgccgacctgaaatacatcggtgagatcgtcctg
atgagccagaatgaccttaaaaacgttaagaatcttggcaaaaaatcgtatgacgagatc
gttgaaaagctcgaagaagccggcttccaggtcggtcaggagatgagcgacgagacgatc
agcgtactgaaaaagaaaattgaatctgaataa
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