Thiosulfativibrio zosterae: THMIRHAT_00260
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Entry
THMIRHAT_00260 CDS
T06856
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tzo
Thiosulfativibrio zosterae
Pathway
tzo03030
DNA replication
tzo03410
Base excision repair
tzo03420
Nucleotide excision repair
tzo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tzo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
THMIRHAT_00260 (polA)
03410 Base excision repair
THMIRHAT_00260 (polA)
03420 Nucleotide excision repair
THMIRHAT_00260 (polA)
03440 Homologous recombination
THMIRHAT_00260 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tzo03032
]
THMIRHAT_00260 (polA)
03400 DNA repair and recombination proteins [BR:
tzo03400
]
THMIRHAT_00260 (polA)
Enzymes [BR:
tzo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
THMIRHAT_00260 (polA)
DNA replication proteins [BR:
tzo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
THMIRHAT_00260 (polA)
DNA repair and recombination proteins [BR:
tzo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
THMIRHAT_00260 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
THMIRHAT_00260 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
RNase_T
Coatamer_beta_C
HHH_2
Motif
Other DBs
NCBI-ProteinID:
BBP42280
UniProt:
A0A6F8PJV2
LinkDB
All DBs
Position
28475..31294
Genome browser
AA seq
939 aa
AA seq
DB search
MTQILPEFNPHSPFILVDGSSYLFRAFHAMPPLTNSQGEATGAIFGVINMIGKLLEQYQP
ERIAVVFDAKGKNFRHEMYPDYKAHRPPMPDELRSQIQPIQDIIKALGIPLLVIDGVEAD
DVMGTLAQQATEIELDSLLSTGDKDMAQLVNEHITLINTMNDTLMTPETVVEKFGVRPNQ
MIEYLALVGDTADNIPGIPSCGPKTAVKWLQAFGNIDNLIENAPMIGGKIGEKLRDNINQ
LRLSRQLTTIKLDCDLPVHVGDIKRQAADMEALTTLFTRYELRQWLAKVAKGELPFSVST
GRKAHSQTLSTAPIESATETTQAFDVPHETTTTSEQFDLILDWALFNTWLTRLENAELFA
IDTETTGLDSMVDTIVGLCFAVLENGQTISAYCPLMHDYEGAPQQLPKVEVLAKLKPLLE
DTQPKKVGQNLKYDWHIFQNEGINLQGIAFDTMLESYCLNSVATRHNMDDLALKYLNHTT
THFEDIAGKGKGQLTFNQIDIHTAARYAAEDAAITLQLHQTLWPQLQADPAVATVLSEVE
MPLISILGQMERNGVLIDKQKLADQSYELTGKLADLEQQAHLIAGENFNLNSAKQLQVIL
FEKLQLPVLKKTPKGQASTAEPVLAELAERGHELPTLILEYRSLAKLKSTYTDALPKQIN
VKTGRVHTSYQQAVASTGRLSSTDPNLQNIPIRSAEGRRIRQAFIAAPGYVLLAADYSQI
ELRIMAHLSGDAGLLNAFALGEDIHKATAAEIFGVPLSAVTTEQRRGAKAVNFGLIYGMS
AFGLANQLNVDRATAQNYINLYFARYPGVAHYMESTKARAKQNGYVETLMGRRLYLPDIN
AKNGQLRQYAERTAINAPMQGTAADIIKTAMKNTQAWLNLGQFDAKMLMQVHDELVFEVA
ESQVEDFKPHLKHIMESALTLAVPLLVEMGVGDNWDEAH
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgacacaaatcctccccgaatttaatccgcacagcccttttattttggtggacggttct
tcttacttgttccgcgcctttcatgccatgccacctttaaccaattctcagggcgaagcc
acaggcgccatttttggggtgattaatatgattggtaaactccttgagcaatatcaacct
gagcgcattgcggtggtttttgatgccaaaggtaaaaattttcgtcatgagatgtaccct
gactataaagcacaccgcccgcctatgccagacgaattacgcagccaaattcaacctatt
caagacattatcaaagcactaggcattcccttgttagtgattgatggcgtggaagccgac
gatgtgatgggcactttggcacaacaagccacagaaattgagcttgatagcctactttcg
actggtgataaagacatggcgcaattggtcaatgaacatatcacgctcattaataccatg
aacgacaccttgatgaccccggaaactgtggtcgaaaaatttggggtgcgccctaaccaa
atgattgaatatttagcactggtgggggataccgctgacaatattccaggtattcccagt
tgtggccctaaaacagctgttaaatggttacaggcttttggcaatatcgataatctgatt
gaaaacgcccccatgattggcggcaagatcggcgaaaaattgcgcgacaatattaatcaa
ctgcgcttatcacgccaactgaccaccattaaactcgattgcgatttgcccgtgcatgtt
ggcgacattaagcgccaagcggccgatatggaagcgcttaccactttattcacgcgttat
gaattgcgccaatggctagccaaggttgccaaaggcgaactgccttttagtgtgtcaaca
ggacgcaaggcgcacagccaaacgctatcaactgcgcccatagagtcagcaacagaaacc
acgcaagcgtttgatgttccacatgaaaccacaaccacctctgagcagtttgatttaatt
ttagattgggcgttatttaacacctggctaacacgccttgaaaacgccgagctatttgcg
attgataccgaaaccactggtttagatagcatggtcgatacgattgttgggctgtgcttt
gcggtgctagaaaacggccaaaccatttcggcttattgccctttgatgcacgattatgaa
ggcgcaccgcaacaactgcccaaagttgaagtcttggcaaaactcaaaccattactcgaa
gatacgcaacccaaaaaagtgggtcaaaacctgaaatacgattggcatatttttcaaaac
gaaggcattaacctgcaaggcatagcgtttgacaccatgctggagtcttattgccttaac
tccgtggctacgcgtcacaatatggacgacttggcacttaaatacctcaaccacaccacg
acgcactttgaagacatcgctggcaaaggcaaaggacagctcacttttaatcaaatagat
attcacactgctgcacgttatgccgccgaagatgccgccatcacccttcaactgcaccaa
actctctggcctcaactgcaagccgacccagccgtggcaaccgttttgagcgaagtggaa
atgcccttaatcagtattttggggcaaatggagcgtaatggagtgctcatagacaaacaa
aaactggccgatcaatcctatgagctcaccggcaaactagccgacttagaacaacaagcc
catctaatcgctggcgaaaattttaaccttaattctgccaaacaattacaagtcattttg
tttgaaaaactgcaattgccagtgcttaaaaaaacccccaaaggacaagccagcaccgcc
gaacccgttttagccgaattggcagaacgcggccacgaactgcctaccttgattttagaa
taccgcagtttggcaaaacttaaatctacctataccgatgctttgcctaaacaaatcaat
gtcaaaacaggtcgagtacacacctcttatcaacaggcagtggcatccacggggcgttta
tcgtccaccgatcctaatttacaaaacatccccattcgcagtgccgaagggcgtcgcatt
cgccaagcctttattgccgcgccagggtatgtgttgttggccgccgactattcgcaaatt
gaactgcgcatcatggcgcacttgtcgggcgatgccggattgcttaacgcctttgcttta
ggcgaagacattcataaagcaacggccgctgaaatttttggcgtgcccttaagcgcagtc
accaccgaacaaagacgcggggcaaaagctgttaactttggcttgatttatggcatgtct
gcctttggcttagccaatcaattaaatgttgatcgagccaccgcacaaaactacatcaac
ctgtattttgcgcgctacccaggcgtggcgcattacatggaaagcaccaaagccagagcc
aaacaaaatggttatgttgaaaccctaatgggtcgacgcttatatttgccagacatcaac
gccaaaaacggccaattgcgccaatatgccgaacgcaccgccattaacgcaccgatgcaa
ggtaccgctgccgatattatcaaaactgccatgaaaaacacccaggcctggttaaattta
gggcaatttgacgccaaaatgctcatgcaagtgcacgatgaattggtgtttgaagtggcc
gaatctcaagtggaagactttaaaccccacctcaaacacatcatggaatccgcgctcact
ttagcagtgcccttattggttgaaatgggggttggagataattgggatgaggctcattaa
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