Thiosulfativibrio zosterae: THMIRHAT_03910
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Entry
THMIRHAT_03910 CDS
T06856
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
tzo
Thiosulfativibrio zosterae
Brite
KEGG Orthology (KO) [BR:
tzo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tzo03016
]
THMIRHAT_03910 (truD)
Enzymes [BR:
tzo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
THMIRHAT_03910 (truD)
Transfer RNA biogenesis [BR:
tzo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
THMIRHAT_03910 (truD)
Prokaryotic type
THMIRHAT_03910 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
BBP42645
UniProt:
A0A6F8PKM1
LinkDB
All DBs
Position
504884..505876
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AA seq
330 aa
AA seq
DB search
MSYAFNQLAYAYGKPECQGQLKAKPEDFQVEEILGFELSGEGEHLWLWVEKRGENTDWVA
QQLAKWAGVNERYVGYAGKKDRQAVTRQWFSVHLPGKPNPDLDLLNLDNVEVLKVQRHQK
KCQTGCLAGNRFVLVLRDLQGNLTQLQTRLQSIQQQGVPNYFGEQRFGKDMGNLKQAEAL
FAQLPAERAAKKRHKLSAAQQNQRGLYISAARSWIFNQVLNQRILAKCWADEIEGDLLNL
ESLPTGPLVGRGRLGVAGKALALETEVMAEFTEWLNALEHLGLQQERRALVLKPQAMTWA
LQDQHLQLAFSLPAGSYATMLVRELVVASE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatgcttttaatcaactggcttatgcctatggaaaacctgagtgccaagggcaa
ctgaaagccaagcctgaagactttcaagttgaagaaatcttaggctttgaactgagtggc
gaaggggagcatttgtggctttgggttgaaaagcgcggtgaaaataccgattgggtggcg
caacaactggctaaatgggcaggagtcaatgaacgctatgtggggtatgccggcaaaaaa
gaccgccaagccgtcactcgacaatggtttagtgtgcatttgccgggtaagccgaatcct
gatctggatttattaaatctagacaatgtagaggtgttaaaagttcagcgccatcaaaaa
aaatgccaaacaggctgtttggcgggtaatcgatttgttctggtattacgagatttacaa
ggtaatctaacccagttacaaacccgcttacaatccattcaacaacagggtgtgcctaac
tattttggcgagcagcgctttggcaaagacatgggtaatcttaagcaagcagaagcttta
tttgcacaattgcccgctgagagagcggccaaaaagcgccataaactatctgcggcgcaa
caaaaccagcgcggcctgtatatctctgcggcacgctcatggatttttaatcaagtatta
aatcaacgcattttggcaaagtgctgggcagatgaaatcgagggggatttactgaacctt
gaaagtttgccaaccggtccattggtcggtagaggtcgattaggggttgcaggtaaagca
ctggctttggaaaccgaggtgatggctgagtttaccgagtggttaaatgcattggagcat
ttaggcttgcaacaagagcgtcgggcgttggtcttaaaaccgcaagcaatgacttgggcg
ttgcaagaccagcatttgcaattagcatttagcttaccggcaggcagttacgccactatg
ttggtgcgggagctggtggtcgccagcgagtaa
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