Thiosulfativibrio zosterae: THMIRHAT_06550
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Entry
THMIRHAT_06550 CDS
T06856
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
tzo
Thiosulfativibrio zosterae
Pathway
tzo00470
D-Amino acid metabolism
tzo00550
Peptidoglycan biosynthesis
tzo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tzo00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
THMIRHAT_06550 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
THMIRHAT_06550 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tzo01011
]
THMIRHAT_06550 (murD)
Enzymes [BR:
tzo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
THMIRHAT_06550 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
tzo01011
]
Precursor biosynthesis
Amino acid ligase
THMIRHAT_06550 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
BBP42909
UniProt:
A0A6F8PLD0
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All DBs
Position
792286..793620
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AA seq
444 aa
AA seq
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MHLVAGLGLTGLSVLRYFDRLGEACFGFDTRADFDLSGIQAEFPDGQFAVGSLPPTWVKK
IDAIVLSPGIAKSEPWVLELIQQGIEVIGDIELFARTVGQPIIGITGSNGKSTVTTLVTE
VLTQAGYQVGMGGNIGTPALDLLASDQPEYQVFVLELSSFQLETTYSMHTIASTILNLSE
DHMDRYAGLEDYLQAKMNIFNHTELAVLPSNFPSHVFVQAPKLVRFGDGSPNGVMHLDGE
DWLVFEQQKIIKVSDMALQAEHHYMNALATIALCSVFGIETSVYQTVFSCFKGLPHRTQL
VAQQDGVSWINDSKGTNVGATVTAIQSMGKSANGKVILLAGGVGKDADFSDLAPVMQTYG
RHSILFGRDQNLIAQALSSTPYTCVEDLSQALKLAKSLALPGDVVLFSPACASFDQFKNY
AHRGQVFEASVIELLQNCHLQVSA
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgcatctggtggcaggcttagggctgacagggttgtcagtattgcgctattttgaccgt
ttgggcgaggcctgctttgggttcgatacccgagcagactttgatttgtctggcatacag
gcagagtttcctgatggacagtttgccgttggcagcttaccgccaacttgggttaaaaag
atagatgccattgtattaagtcctggcattgccaaatctgaaccttgggtgttggaattg
attcagcaaggtattgaggtgattggtgacattgaattgtttgccagaaccgttgggcaa
ccgattattgggattaccggttctaatggcaaaagcacggtgacaacgctggtcactgaa
gtactcacccaagcaggttatcaagtgggtatgggggggaacatcggtacgccagcctta
gatttattggccagtgatcagcctgaatatcaagtgtttgtgttggagttatccagtttt
caactggaaacgacctattctatgcataccatcgcttcaaccatcttaaatttgtccgaa
gatcatatggatcgttatgcgggtttagaggactatttgcaagccaagatgaatattttt
aatcacacagaattggctgttttacccagtaacttccccagtcatgtttttgtgcaagcg
cctaagcttgtgcgctttggtgacgggagtccaaatggggtcatgcatttggacggcgaa
gattggttggtatttgagcaacaaaaaataatcaaagtttccgacatggctttgcaagcg
gagcatcattatatgaacgccctagccaccatcgctttgtgtagtgtgtttggcattgaa
acatcagtttatcaaacggtgtttagctgttttaaaggattaccacatcgcacccaactg
gttgcacagcaggatggcgtgagttggattaatgattctaaagggacgaatgtgggggcg
acggtgactgccattcagtcgatgggtaagtcagctaacggaaaagtgattttattagcc
ggtggcgttggcaaggatgccgactttagcgatttagcgccagtgatgcaaacctatggt
cgccacagtatcctctttgggcgagatcaaaatttaatcgctcaggcattaagttcaacg
ccttacacttgtgtcgaagacttgtcgcaagccttaaaactggcaaaatccttagctttg
ccaggtgatgtggtgttgttttcgcccgcatgtgccagttttgatcaatttaaaaattat
gcgcaccgtggtcaagtgtttgaagccagtgtgattgagctgttgcaaaattgccatctg
caggtcagcgcatga
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