Thiosulfativibrio zosterae: THMIRHAT_09180
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Entry
THMIRHAT_09180 CDS
T06856
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
tzo
Thiosulfativibrio zosterae
Brite
KEGG Orthology (KO) [BR:
tzo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tzo03400
]
THMIRHAT_09180 (phrB)
Enzymes [BR:
tzo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
THMIRHAT_09180 (phrB)
DNA repair and recombination proteins [BR:
tzo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
THMIRHAT_09180 (phrB)
Prokaryotic type
THMIRHAT_09180 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DUF4385
Motif
Other DBs
NCBI-ProteinID:
BBP43172
UniProt:
A0A6F8PM38
LinkDB
All DBs
Position
complement(1053172..1054620)
Genome browser
AA seq
482 aa
AA seq
DB search
MTTLVWCQRELRLQHHLGLQMALKQPDLVIFSYFHDPKLTIGGTESANSLWLAKSLQALQ
TDIQNLGGAIWIHEGDFAEQFTQLLKTHNITEVIYSFQPGEPFVTQQNLALQICQTHQVK
LTPLYSEFLIEPSRFSNQQGKPYLVFTPFYKALMQRQDQCHTLDAAIPDLKATAQIPVPE
SAKHLPQSLQALLQKPWAQKLLAHWDISEAAAWQQADSFLANSVQNYDTDRDFPAIDASS
RLSPYLQFGQISVSGLFTECQARIANGSLKAEAVQPWMRQLVWKEFARHLLCWFPHAETQ
PFQAKYNAMDWADADENTQAWQLSQTGIPIIDAGMRELWATGTMHNRLRMLVASLLTKNL
HQHWLLGKNWFDFTLFDADPANNVMGWQWVAGCGVDAAPYYRLFNPVTQSVKFDAEGLYI
RRWVPELKNLSNKAIHAPWEHTQECQMKGIILGKTYPKPIVNLAESRQDHLARVQSLKTP
IC
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccctagtttggtgccaaagagaactgcgtttacaacatcacttagggctgcaa
atggcgctaaaacaaccagatctggttatttttagctattttcacgacccaaaactcact
attggcggcacagaatctgccaacagcttgtggctggcaaaaagcttgcaagccctgcaa
acggatattcaaaatctgggcggtgctatttggatacacgaaggtgactttgcagagcag
tttactcaactgctaaaaacccataacattactgaagtgatttacagctttcaaccgggt
gaaccctttgtcacccagcaaaacttagcgctgcaaatttgccaaacacatcaagtcaaa
ctcacaccgctctattccgagtttttaattgagccaagccgctttagtaatcaacaaggc
aaaccctatttggtgtttacccctttttacaaagccctcatgcaacgccaagaccaatgt
cacacactcgatgccgccattcctgatttaaaagctacggcacaaatccctgtgcctgag
tctgccaaacatttgccccaaagtttacaagccttacttcaaaaaccttgggctcaaaaa
ctacttgcgcactgggacatcagcgaagccgctgcttggcaacaagccgattctttttta
gccaactcggtacaaaactatgacaccgatcgtgatttcccggcaatcgatgccagcagt
cgtttatcgccctatttgcaatttggccaaatctcggtcagcggattatttacagaatgc
caagcgcgtattgccaatggcagtttaaaagccgaagccgtgcaaccttggatgcgccaa
ctggtttggaaagagtttgcccgccacttgctttgctggtttccgcatgctgaaacccag
ccatttcaggccaaatacaacgctatggattgggcagatgccgatgaaaacacccaggcc
tggcaactcagtcaaacgggtattccgattatcgatgccggcatgcgcgaactttgggca
accggcaccatgcacaatcgattgcgaatgctggtcgcatcgctcttaaccaaaaacctg
catcaacattggctgttgggaaaaaactggtttgactttactttgtttgatgccgaccct
gccaataatgtcatgggctggcaatgggtcgctggctgtggcgtggatgcagcgccctat
tatcgattgtttaatccggtgacgcaaagtgtcaaatttgatgctgagggactttatatt
cgccgttgggtgccagagttgaagaacttatccaataaagccatacatgcaccttgggaa
cacacccaagaatgccaaatgaaaggcattattttgggtaaaacctatccaaaaccgatt
gttaatctcgctgaatctcgccaagatcatttggcgagggtgcaatcgcttaaaacccca
atttgctaa
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