Thiosulfativibrio zosterae: THMIRHAT_10100
Help
Entry
THMIRHAT_10100 CDS
T06856
Symbol
sbcD
Name
(GenBank) nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
tzo
Thiosulfativibrio zosterae
Brite
KEGG Orthology (KO) [BR:
tzo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tzo03400
]
THMIRHAT_10100 (sbcD)
DNA repair and recombination proteins [BR:
tzo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
THMIRHAT_10100 (sbcD)
Archaeal homologous recombinant proteins
THMIRHAT_10100 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
BBP43264
UniProt:
A0A6F8PMJ2
LinkDB
All DBs
Position
1147022..1148158
Genome browser
AA seq
378 aa
AA seq
DB search
MLKIIHTADWHLGRVLHNQSLLADQAVVLEQILTYIKDHQVDALLVAGDIYDRSIPPAEA
IKLLNGFINQLALINVPIIMITGNHDGAERLSFASQQLQAAGVHILGNLNQVTVPVVLQK
ADVTVKVYGIPYADPESVRDAFGCEVKGYDEAHTFLVEQVKAVYEHNANNLLMSHCFVDG
CETSESEKTLSIGGSDRVSFEPMMDFNYVALGHLHSPQQRGADHIRYSGSLLKYSFSEHQ
QKKGVTLLEFDEKGLVKHQHLTLKPQKEVRVLEGLLEEVIAQGKTDPHKEDYIMVRLTDQ
TALLDPMGKLRVVYPNILHLEKTLLTQAMGKTPNRDALKRGAEHMIQDFFKQVTGHEMTP
EQLTIIEATLKSIHTQEA
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaatcatccacaccgctgactggcacttaggtagagtgttgcacaatcaatcc
ttattggccgatcaagcagttgttttagaacaaattttgacctatataaaagaccatcaa
gtggatgccttgctagtggcaggcgatatttacgaccgttctattccaccggctgaagcc
atcaaactgttgaacggctttatcaatcaactcgctctaatcaatgtgcccattattatg
attaccggtaatcatgatggtgcagagcgtttaagttttgcgtctcaacaattgcaagcc
gccggggttcatattttgggcaatctcaaccaagtcactgtgccggtggttttgcaaaaa
gcagatgtcaccgtaaaggtatatggtattccctatgccgacccagaaagtgtgcgtgat
gcttttgggtgtgaagtcaaaggctatgatgaagcccatacttttttggttgagcaagtg
aaagccgtttatgagcataacgccaataacctgttgatgagtcattgctttgtggacggt
tgcgaaacctctgagtctgaaaaaaccctttcaattggcggttcagaccgagtgtcgttt
gaacccatgatggattttaactatgtcgccctaggacatttacacagtccacagcaaagg
ggggccgatcatattcgctattcaggatcccttcttaaatacagcttctcagagcatcaa
caaaaaaagggcgtcaccctgttagagtttgatgagaagggtctggttaaacaccaacat
ctcacccttaaaccccaaaaagaagtcagagttttagaaggcttattagaggaggttatt
gcccaaggtaaaactgatccgcataaagaggattatataatggtgcgcctcaccgaccag
acggcattactcgaccctatgggaaaactgcgcgtggtttatcctaatattttgcaccta
gaaaaaactctattaacgcaagccatgggcaaaacccccaatagagatgccttaaaacgc
ggcgccgagcatatgattcaagacttctttaagcaggtcaccggacatgagatgacccca
gaacaactgactattatcgaagccacgctaaaatccattcacacccaagaagcctaa
DBGET
integrated database retrieval system
