Thiosulfativibrio zosterae: THMIRHAT_11980
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Entry
THMIRHAT_11980 CDS
T06856
Name
(GenBank) transcriptional regulator
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
tzo
Thiosulfativibrio zosterae
Brite
KEGG Orthology (KO) [BR:
tzo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tzo03000
]
THMIRHAT_11980
Transcription factors [BR:
tzo03000
]
Prokaryotic type
Helix-turn-helix
Other families
THMIRHAT_11980
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PAS
PAS_9
Sigma54_activ_2
PAS_8
PAS_4
AAA_5
AAA
AAA_2
Mg_chelatase
HTH_8
bpMoxR
AAA_16
PAS_3
AAA_22
Diguanyl_cycl_sensor
PAS_7
Motif
Other DBs
NCBI-ProteinID:
BBP43452
UniProt:
A0A6F8PMW8
LinkDB
All DBs
Position
complement(1331804..1333690)
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AA seq
628 aa
AA seq
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MSQIFSDAFNKNPNAMIIIDPVKDEICYVNLAAEALLKQSNKTLTTLKATQLFRHCIPTL
FTFTEEALIKTTAWTRDLHIQFNDDQPIYLEVSAGKISQNSNQRKEFICLTLQSQQEINR
RRIKSDAKFLHQNGLEHWKTIEHIFREFEHENKLILEAAGEGIYGVDIHGKTTFINPAAE
KILGWKSEELIGKSMHEMIHHSREDGNHYESKNCHIYAAFRDGEVRHVDNEIFWHKNNYP
IPVEYTSTPIMDNHQLIGAVVIFRDVSERKLAERKLHEALNEVQSLKKRLELENAYLQEE
YREEHHYKEIVGKSLAIRKVIQQIELVAPTDASVLISGESGTGKELIARAIHDSSQHKNR
PLIRVNCASIPRELFESEFFGHVKGAFTGAINDRAGRFELANGGTLFLDEVGEIPFELQG
KLLRVLQEQQFERVGESKTRSVDVRIIAATNRDLKEEVAKKQFREDLFFRLNVFPIESIP
LRERTEDIPLLANHLLKIARKKFVKPNIQLTVGDIQKLIDYQWPGNIRELLNVIERGIIL
ATDSRLELNLPLTNQNYTSLKNDIENTFQIQTKQELSNLDKQNIINALKACRGKIFGQNG
AAEALKIKPTTLASRIKKYQINRHQYIN
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaatttttagtgatgcatttaacaaaaatcctaatgcaatgattattatcgac
ccagtaaaggatgaaatttgttatgtaaatctagctgctgaagctttactaaagcaatca
aataaaacactcacaactttaaaagcaactcaattatttcggcactgcatccctactctg
ttcacttttactgaagaagcacttattaaaacaaccgcttggacaagagatttacacatc
caatttaatgatgatcaaccgatttatctcgaggttagtgcgggaaaaatatcccaaaat
agcaatcaaagaaaagagtttatttgccttacgctacaaagccaacaagaaataaatcgc
aggcggattaaatcagacgctaaatttttacatcaaaatggattggaacactggaaaacc
atagagcatatttttcgtgagtttgaacacgaaaataaacttattcttgaggccgctggt
gaaggcatttacggtgtggacattcacggaaaaactactttcataaacccagcggctgaa
aaaatattgggttggaaatctgaagaactgataggtaaaagcatgcatgaaatgattcac
catagccgtgaggatgggaatcactatgaaagcaaaaactgtcatatctatgcagccttt
agggatggtgaagtgcgtcatgtagataatgaaattttttggcataaaaataattaccct
attccggtcgaatacacgagtacgcccattatggataaccatcaactcataggtgcagtg
gttatttttcgcgatgttagcgagaggaagcttgcagaaagaaaacttcacgaagcctta
aatgaagtgcaatctctaaagaaacgattagaacttgaaaatgcctatttacaagaagaa
tatcgcgaagaacatcactataaagaaattgttggcaaaagcctcgcaattcgtaaagtc
attcaacaaattgaactggttgcacctacagatgctagcgtactcattagtggcgagtca
ggcacaggtaaggaactgattgccagagcaattcatgatagtagtcagcacaaaaatcgt
ccactcattagagtgaactgcgcctctatccctagagaactctttgagagtgaatttttc
ggtcatgttaaaggggcttttactggtgcaataaatgaccgtgcaggacgttttgagtta
gcaaatggcggaacgctttttttagatgaagtcggtgaaataccttttgagttacaagga
aaactattgcgtgtacttcaagaacagcaatttgaacgcgtcggtgaatctaaaacacgc
tctgttgatgtaagaatcattgccgcaactaatcgagacttaaaagaagaagtcgcaaaa
aaacagtttcgagaagatttgtttttcagactgaatgttttcccaatagagtcaatccca
ctgcgtgaaaggactgaagatattccattattagctaaccacttattaaaaattgcccgt
aaaaagtttgtaaaaccaaatattcaactaaccgtaggtgatatacagaaattaattgat
tatcaatggcctggaaacattcgcgaattactaaatgtcattgaaagaggtatcatttta
gctaccgattcgcgtctggagttaaatctaccgctaacaaatcagaactacacatcctta
aaaaacgacattgaaaatacatttcaaatacaaactaaacaagaactatcgaacctagat
aaacaaaatattattaatgcacttaaagcttgccgtggcaaaatatttggacaaaatggc
gcggcagaagcattaaaaataaaacccaccacacttgcatctcgcattaaaaaatatcaa
attaatagacatcaatacatcaactaa
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