Thiosulfativibrio zosterae: THMIRHAT_13430
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Entry
THMIRHAT_13430 CDS
T06856
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
tzo
Thiosulfativibrio zosterae
Pathway
tzo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tzo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
THMIRHAT_13430 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tzo03019
]
THMIRHAT_13430 (pnp)
03016 Transfer RNA biogenesis [BR:
tzo03016
]
THMIRHAT_13430 (pnp)
Enzymes [BR:
tzo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
THMIRHAT_13430 (pnp)
Messenger RNA biogenesis [BR:
tzo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
THMIRHAT_13430 (pnp)
Transfer RNA biogenesis [BR:
tzo03016
]
Prokaryotic type
tRNA degradation factors
THMIRHAT_13430 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
S1_RRP5
KH_KhpA-B
OB_RRP5_4th
KH-I_KHDC4-BBP
S1_2
KH_SLS1_2
Bac_luciferase
DUF3016
aRib
Motif
Other DBs
NCBI-ProteinID:
BBP43597
UniProt:
A0A6F8PNI6
LinkDB
All DBs
Position
complement(1484898..1486994)
Genome browser
AA seq
698 aa
AA seq
DB search
MAKVTHSFQYGAHTVTLETGEIARQADGAVMIGMGDTRLLVTAVASKSVSEGQDFFPLTV
NYQEKAFAAGKIPGGFLKREGRPSEHETLTSRLIDRPIRPLFPKGFMNEVQIIATVLALD
PEVGTEVAAMLGTSAALAISGIPFDGPLGAAVVGYRDGEYLLNPSELDLETSDLELSVAG
TRDAVLMVESEAAELSEEIMLGAVMFGFQQMQVAIDAINEFKAQVGKPTWDWQAAPVNVE
LKDAVYAAARADVEAAYSIADKMARYAALDAAKAKLLETLVATETNPQGYAAKAIEGMFE
KLQKDIVRSRIIAGEPRIDGRDTKTIRAINCQVGVLPKVHGSALFTRGETQALVVTTLGT
EKDAKIVDELTGSYHDRFMLHYNFPPFSVGECGRTGSPGRREIGHGMLARRGVAALLPTA
DEFPYTIRVVSEITESNGSSSMATVCGTSMSLMHAGVPIAAPIAGIAMGLIKEDSGFAVL
SDILGDEDHLGDMDFKVAGTDQGVTALQMDIKIQGITEEIMQIALEQAKAGRLHILKAMD
SAINHSNTEVATTAPRFFNVKVKPEKVREIIGKGGATIRALTEESGCVIEIDDDGNVKIA
ATDDVSAEIAKRKIAEIVAEPEIGMTYDAVVKKIVDFGAFVAYMPGREGLVHVSQIAEER
VEDVSKYLAEGQEIRVKLIDIDKQGRVKLSMKEAEPKA
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagtgacacattcatttcagtatggcgctcatacggtaactctagaaacaggt
gaaattgcgcgccaagcagacggtgcagtaatgatcggcatgggcgatacgcgcctttta
gtcacggcagtggcgtcaaagagtgtcagcgaaggtcaagattttttcccgctaaccgtt
aattatcaagaaaaagcttttgcggctggcaaaattccaggtgggtttttaaagcgtgaa
gggcgtccatctgagcacgaaaccttaacttctcgtttaattgaccgcccgattcgtcct
ttatttcccaaaggatttatgaacgaagtgcaaatcattgccaccgttttggctttagat
ccagaagtgggtactgaagtggccgctatgctaggaacttcagcggctttagccatttct
ggtattccatttgatggacctttaggtgctgctgtcgtcggttaccgtgacggtgaatat
ttactaaacccttcagaattagatttagaaacctctgacttagaattgagtgttgcagga
acgcgagatgcggtgttgatggttgaatcagaagccgctgagttgtctgaagaaatcatg
ttgggcgcggttatgtttggtttccaacaaatgcaagtggccattgatgcgataaatgag
tttaaggcgcaagttggcaaacccacttgggattggcaagcagcacccgttaatgttgaa
ttaaaagatgccgtctatgccgcggcgcgtgcggatgtggaagcggcttatagcattgca
gacaagatggcgcgttatgcggctttagatgctgctaaagcaaaattacttgaaactttg
gttgcaacggaaacgaatcctcaaggatatgctgccaaagcgattgagggcatgtttgaa
aaattgcaaaaagacatagttcgtagtcgcatcattgcaggcgagccaagaattgatggt
cgtgataccaaaacaattcgtgccattaattgccaagttggcgttttaccaaaagtacat
ggttctgccttgtttacgcgtggcgaaactcaggcattggtcgtgaccactttggggact
gaaaaagatgccaaaattgttgatgaattaaccggttcttatcatgaccgttttatgttg
cattataacttcccacctttctctgttggtgagtgtggtcgtacaggttcgcctgggcgt
cgtgagataggtcatggtatgttggcgcgtcgtggtgttgctgccttattgccaacggcc
gatgaatttccctacaccattcgtgtggtgtctgaaatcacagagtcaaacggttcttct
tctatggcaacggtttgcggtacctctatgtctttaatgcatgcgggtgtgccgattgca
gcgcctatcgctgggattgccatgggcttgattaaagaagattctggttttgcggttttg
tctgatattttaggtgacgaagatcatttgggtgacatggactttaaggtcgctggaacc
gatcaaggcgttacggctctacaaatggatatcaaaatccagggtattactgaagaaatt
atgcaaattgccctagaacaagccaaagcgggtcgtctgcacattttaaaagccatggac
tctgccattaatcattcaaataccgaagtcgctaccacggcaccgcgtttctttaatgtt
aaagtaaaacctgaaaaagtgcgtgaaatcattggtaaaggcggcgcaaccatccgtgcg
ttaacggaagagtcaggttgtgtgattgaaattgatgatgatggtaatgttaaaattgct
gctacggatgatgtttctgctgaaatcgcaaaacgcaaaattgccgaaattgttgctgag
ccagaaattggtatgacctatgatgcggtcgttaaaaagattgtcgactttggtgctttt
gtggcttatatgccaggccgtgaaggcctagtgcatgtgtctcaaattgccgaagagcgt
gttgaagatgtttctaaatacctagcagaaggtcaagaaattcgcgttaagttaattgat
atcgataagcaaggtcgcgttaagttgtctatgaaagaagctgaacctaaagcctaa
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