Thiosulfativibrio zosterae: THMIRHAT_13470
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Entry
THMIRHAT_13470 CDS
T06856
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tzo
Thiosulfativibrio zosterae
Brite
KEGG Orthology (KO) [BR:
tzo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tzo03016
]
THMIRHAT_13470 (truB)
Enzymes [BR:
tzo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
THMIRHAT_13470 (truB)
Transfer RNA biogenesis [BR:
tzo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
THMIRHAT_13470 (truB)
Prokaryotic type
THMIRHAT_13470 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
BBP43601
UniProt:
A0A6F8PNA4
LinkDB
All DBs
Position
complement(1488976..1489899)
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AA seq
307 aa
AA seq
DB search
MTDKLEKPAKKTWKKVNGLVIVNKPEGLTSNAVLQKVRRFYSAEKAGHTGALDPFATGLL
PICFGEATKISGLLLDADKGYIATLKLGQATDSGDKDGEPALTAEVPVLTSAQIASTLET
FLGDSTQVPPMYSALKYQGKPLYSYARQGIEIERPARHIHLSYLKLLEFNGSDTLKFEVN
CSKGTYVRTLGEDIAQALGTVGHLIALHRVLTGCLTADLMMDMDELATKVALDESYGLLP
LDLPLGHLESLNLSQEQTDFIQHGGMLALPKPATELVKFYNPEGVFFGVGEWSDTKQMVK
AKRLFNL
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataagttagaaaaaccggctaagaaaacttggaaaaaagtcaatggcctagtg
atagtgaataagccagaaggcttaacctcaaacgcagttttgcaaaaagtgcggcgcttt
tattcggcagaaaaagccggacacaccggtgctttagacccttttgccaccggattactg
cccatttgttttggtgaagccacaaaaatttctgggttattactagatgctgataaggga
tatattgcgaccctaaaattaggacaagcaactgactcgggcgataaagatggcgagccg
gctttgaccgcagaagtgcctgttttaaccagcgctcagatagcatcgaccctagaaact
tttttaggcgacagtactcaagtgccccccatgtattcggcactcaaatatcaaggtaag
cccctgtatagttatgcgcgtcaaggcattgaaattgagcgtcctgccagacatattcac
ttaagttatttaaaacttcttgagtttaatggctcggacacccttaagtttgaagtgaat
tgttctaaaggaacttatgtaagaaccctgggagaagacattgcacaagctttaggtacg
gtggggcatttaattgccttacatcgggttttaacaggctgtttaaccgccgacttaatg
atggatatggatgagttggccacaaaagttgccttggatgaatcttatggcttgttgccc
ttagatttacctttggggcatttagaaagcttgaatttaagccaagaacaaacggatttt
atccagcatggcggaatgctagccttgccaaaaccagccactgaattggtcaaattctat
aacccagagggtgttttttttggggtgggtgaatggtccgataccaagcaaatggtgaaa
gcaaagcgtctttttaatttgtag
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