Thiosulfativibrio zosterae: THMIRHAT_17890
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Entry
THMIRHAT_17890 CDS
T06856
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
tzo
Thiosulfativibrio zosterae
Pathway
tzo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tzo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
THMIRHAT_17890 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tzo03019
]
THMIRHAT_17890 (pcnB)
Enzymes [BR:
tzo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
THMIRHAT_17890 (pcnB)
Messenger RNA biogenesis [BR:
tzo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
THMIRHAT_17890 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
DIOX_N
Motif
Other DBs
NCBI-ProteinID:
BBP44043
UniProt:
A0A6F8PPK0
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All DBs
Position
complement(1974688..1976145)
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AA seq
485 aa
AA seq
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MQKIIRKIRAFLSPQTPVKSSHSPIPTVDLSAPVIIPRDQHGISRSQIDKPALDVLYGLK
RAGYEAYLVGGAVRDLLLGLEPKDFDVVTNADPEQIQAVFKRQCTLIGRRFRLAHVRFGR
NVIEVATFRGEGEASTSSSAIKKRFGRRQEPLRQVDDTGRLLRDNIYGSMDEDIWRRDFT
VNSLYYNIRDFSIIDYAGALEDIEKGQLRLIGDPEERYREDPVRMIRAVRFAAKLGFKIE
VATEKPLFELGSLLLDVSNARLFEEVLKLFHSGVGLEVFEKLRHYGLFEYIFPLTHQTLA
YEDDHFPKMLVIEALKSTDARIQENKSVNPSFLFAAMLWEPMRDLMEQYQEEGESLQDAL
HHAANEVLNAQIKSTAIPKRFTAQMREIWVMQFRLPSRHGDKAQRLTEHPRFRAAYDFLG
VRVAAGEEDLASLFDWWTQYQEKNPVEQVAFANDIEQPSRRKKRPRRNRNPYRKSSGAKA
NTGDL
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaatcattcgtaaaattcgagcttttttaagccctcaaacgcctgttaagtca
agccattcgcccatccctacagttgacttatctgcccctgtgattattccccgtgaccaa
catggtatttctcgcagtcaaatcgataagcccgcgttagatgtgctttatggtttaaag
cgtgccggttatgaggcttatttggttggcggtgccgtgcgcgatttgttactgggatta
gagcccaaagattttgatgtggttaccaatgcagatcccgagcaaattcaggcggtattt
aagcgccaatgtaccttaatagggcgccgctttcgtttagcgcatgtgcgctttgggcgc
aatgtgattgaagtggcgacctttagaggtgagggtgaagcctcgaccagctctagtgcc
atcaaaaaacgctttggcagacgccaagaacctttgcgccaagtcgatgataccggccgt
ttgttgcgcgacaatatttatggcagcatggatgaagacatttggcgccgtgattttacc
gtcaatagcctatattacaatatccgtgatttttctattattgattatgcgggcgcttta
gaagatattgaaaaagggcagttgcgtttaattggcgacccagaagagcgctatcgtgaa
gacccggtgcgcatgattcgtgcggtgcgttttgcggcaaaattgggctttaagatagag
gtggcaactgaaaaaccgctgtttgaattaggcagtttgttgttggatgtatcgaatgca
cgcttgtttgaagaagtgttaaaacttttccacagtggcgttgggttggaagtgtttgaa
aagcttcgccattatggcttgtttgagtatatcttcccattaacgcaccaaactctggct
tatgaggatgatcattttcccaaaatgctggtgattgaggccttgaaaagcaccgatgcg
cgaattcaagaaaataaaagtgtgaatccttcgtttttgtttgccgccatgttgtgggaa
cccatgcgtgatttaatggagcagtatcaggaagagggtgaatctttgcaagatgccttg
catcatgctgccaatgaagtgttgaacgcacaaattaagagcactgccattccaaaacgc
tttacggcgcaaatgcgcgaaatttgggtgatgcagtttagattgcccagtcgccatggc
gataaagcacaaagattaaccgagcatccacgctttagagcggcttatgatttcttgggc
gtaagggttgcggctggcgaagaagatttggcgagtttgtttgactggtggacccaatat
caagaaaaaaatcccgttgaacaggttgcttttgccaatgatattgaacagccatcgcgc
cgtaaaaaacgcccaagacgcaaccgtaatccttatcgtaaaagcagtggtgcgaaagcc
aacactggcgatttgtaa
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