Thiosulfativibrio zosterae: THMIRHAT_18090
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Entry
THMIRHAT_18090 CDS
T06856
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
tzo
Thiosulfativibrio zosterae
Pathway
tzo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tzo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
THMIRHAT_18090 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tzo03019
]
THMIRHAT_18090 (orn)
03009 Ribosome biogenesis [BR:
tzo03009
]
THMIRHAT_18090 (orn)
Messenger RNA biogenesis [BR:
tzo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
THMIRHAT_18090 (orn)
Ribosome biogenesis [BR:
tzo03009
]
Eukaryotic type
Pre-60S particles
RNases
THMIRHAT_18090 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Sf6_terminase
CDK5RAP3
Motif
Other DBs
NCBI-ProteinID:
BBP44063
UniProt:
A0A6F8PPM4
LinkDB
All DBs
Position
complement(1996191..1996742)
Genome browser
AA seq
183 aa
AA seq
DB search
MKSENNLIWIDLEMTGLEVRHDTIIEIATVITDANLNVLAEGPVMAIHVEQARLDAMDEW
CTTHHGNSGLTKRVQESGITLRQAELATLEFIRQYVPKGQSPMCGNSICQDRRFLIEEMP
ELEAFFHYRNLDVSTLKELAKRWAPQVYSSHQKKSVHLALDDIYESIDELKHYRQFLLSG
VAQ
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccgaaaataatttgatctggatagatttggaaatgacgggtttagaagtgcgt
catgacaccatcatcgaaattgccacagtcatcacggatgcgaacctcaatgtacttgcc
gaaggacctgttatggccattcatgtggagcaagctaggttagatgcgatggatgaatgg
tgcaccacccaccacggcaattctggtcttaccaagcgcgttcaagagagtggcatcact
ttacgacaagccgagttggccacattagagtttattagacagtatgtgcccaaagggcaa
tcacccatgtgtggcaacagtatttgccaagatcgtcgttttttaatagaagaaatgcca
gaactagaggcgttttttcattaccgcaatttagatgtgagcacgcttaaagaattggca
aagcgctgggcaccccaggtttattcttctcatcaaaagaagagtgtgcatctcgcgtta
gatgatatttacgagtcgattgacgagctcaagcactatcgacagttcttgctgtctggt
gttgcgcaataa
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