Thiosulfativibrio zosterae: THMIRHAT_21480
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Entry
THMIRHAT_21480 CDS
T06856
Name
(GenBank) ligand-gated channel
KO
K02014
iron complex outermembrane recepter protein
Organism
tzo
Thiosulfativibrio zosterae
Brite
KEGG Orthology (KO) [BR:
tzo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tzo02000
]
THMIRHAT_21480
Transporters [BR:
tzo02000
]
Other transporters
Pores ion channels [TC:
1
]
THMIRHAT_21480
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
OMP_b-brl
Motif
Other DBs
NCBI-ProteinID:
BBP44402
UniProt:
A0A6F8PQJ5
LinkDB
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Position
complement(2378048..2380222)
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AA seq
724 aa
AA seq
DB search
MHLKTLVAAMCAVTLSPVWAATELPRVSVAETADQKMQPIEITTSTSLSLDKAEQQRNAT
TSLGAALSDLPGVNNLGAGSQSGKPVVRGDTALRLPVLSNGMAMDYQAEGTRHNPNVDPV
LADEVEVIRGPQGLKYSSQAVKGAVNVQGLKIDYAAPGKTDLKGEVVGEVNSNNNEHMLG
LKAQVSSSRLSLVGGVTQREGDNFVTPKGTEAGVVNMGEPAGNLPLVTGETPYTNFKNQA
ASLGLGYQDDWGKVELRHTYWQSKQNYLGVESDGPGQPFELMAAAGQVLTNQETQLKAEW
FAGDWVIKPQVSVTRNSREAAHDVPFEEMSSLPRADILDLLVKRTELKLSAEHPEVAGWR
GEFGASGFDKTQDLRSGELSPSATEKGQGVFVVEKRAFGKLQIEAGARWDTQDVKAPVDA
HFADVYNETNNEQSFADWSGALGAAYPLDSQWTVTANLGRSFRAPSIFELYAGGAHGGVQ
AYQLGNPNLKAETSVNSELALTFQASHLQSTFAVYSNWVDNYIVLENTGRYRYAEGTTDE
GQVVLDVNNPTGIYVPEMQSQQTTALIQGAEWSAKYQTTSRLLWKATAEVMQGRDTVKNR
ELPLMPANNASLQAQYTFANLGVLASPSLGLKTRYVAEKKSAGLYEPYSQFDKTPFGTAS
TPDYWLWEVQAGTDLKLGKQALQLDLTVQNLFDTQYRDFLDTYKGTAQGMGRNVKLNVRM
PFGV
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgcatcttaaaacgcttgtggcagccatgtgtgctgttaccctgtcgcctgtgtgggcg
gcaaccgaattacctcgcgtcagtgttgcagaaactgctgatcaaaaaatgcaacccatt
gaaatcaccacctctacctctttgtctttggataaagccgagcaacaacgcaatgccaca
acctctttgggtgcagccctgtctgacttgcccggggtgaataacctaggtgctggttca
caatcgggtaaacctgtggtgcgtggtgataccgcattacgcttaccagtgctgtcaaac
ggcatggcgatggattatcaagctgaaggcacgcgtcataaccctaatgtcgacccagtg
ctggcagatgaagtggaggtcattcgcggcccgcagggtttgaaatattctagccaagcg
gtcaaaggcgcggtgaatgtgcaaggtctcaaaatagattatgccgcaccgggtaaaact
gaccttaagggtgaagtcgttggtgaagttaactctaataacaatgaacatatgctgggt
cttaaggcacaggtgtcgtctagtcgattgagtttagttggcggggttacgcaacgcgaa
ggcgataattttgtaacccccaagggcactgaagccggtgtggtgaatatgggagagcca
gcgggaaatttgcctttagtcactggcgaaacgccctataccaactttaaaaaccaagcc
gcctctttgggcttgggctatcaagacgattggggcaaggttgaactgcgccacacctat
tggcaaagcaaacaaaactatttgggcgttgagtcagatggcccaggacagcccttcgag
ctgatggcggcggcaggtcaagtgttgaccaatcaagaaacccagctcaaggccgaatgg
tttgcaggggattgggtgattaaaccgcaagtatcggtgacgcgtaacagccgtgaagcg
gcgcatgatgtgccgtttgaagagatgagcagtttaccgcgcgccgatattttagattta
ttggttaaacgcactgaattaaaactctccgcagaacatcccgaagtggccggttggcgt
ggtgagtttggcgcgagtggttttgataaaacgcaagacttgcgctctggcgaactctca
ccgtcggccaccgaaaagggtcaaggggtgtttgtggttgaaaagcgtgcctttggcaaa
ctccaaattgaagccggcgctcgttgggacacacaagatgtaaaagcaccggtggatgcg
cattttgcagatgtatataacgaaaccaataatgaacaaagttttgctgattggtcgggt
gctttgggtgcggcttatcctttagattctcagtggactgtaacggctaacttagggcgt
agtttccgtgcgccatctatttttgaattgtatgccggtggcgcacatggcggtgtgcag
gcttatcagttgggtaatcccaatttaaaagcagaaacctcggtcaactctgagcttgcg
ctcacttttcaagccagtcatttgcaaagtacttttgcagtctattccaactgggtagac
aactatattgtgctcgaaaataccggcagataccgttatgcagaaggcacaacggatgaa
ggccaagtagttttagatgtgaataacccaacgggtatttatgtacctgaaatgcaaagc
caacaaacaacggctttaattcaaggcgcagaatggtcggcaaaatatcaaacgacatcg
cgtttattatggaaagcgacggcggaagtgatgcaaggacgcgatactgttaaaaatcgt
gaactacccttaatgccggccaataatgccagtttgcaagcccaatacacctttgcaaat
cttggggttttggcgtcacccagcttgggtttaaaaacccgttatgtggcagaaaagaaa
tcagccggtctgtatgagccttacagtcaatttgataaaacgccttttggaaccgcctca
acgccagactattggttatgggaagtccaagcaggcacagacctcaaattgggcaagcag
gccttgcaattggacttaacggtgcaaaatctgtttgatacgcaataccgagatttcttg
gatacctacaaaggtacagcacagggcatgggtcgcaatgttaagttgaatgttcggatg
ccttttggcgtttaa
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