Ursus arctos (brown bear): 113240998
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Entry
113240998 CDS
T05909
Symbol
CSPG4
Name
(RefSeq) chondroitin sulfate proteoglycan 4 isoform X1
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
uah
Ursus arctos (brown bear)
Brite
KEGG Orthology (KO) [BR:
uah00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
uah00535
]
113240998 (CSPG4)
04091 Lectins [BR:
uah04091
]
113240998 (CSPG4)
Proteoglycans [BR:
uah00535
]
Cell surface proteoglycans
Others
113240998 (CSPG4)
Lectins [BR:
uah04091
]
C-Type lectins
Others
113240998 (CSPG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
113240998
NCBI-ProteinID:
XP_026334357
LinkDB
All DBs
Position
Unknown
AA seq
2324 aa
AA seq
DB search
MRWGQQPAPPAPALALALTLAMLARSSSAASFFGENHLEVPVATALTDIDLQLQFSTSQP
EALLLLAAGQADHLLLQLHSGYLQVRLTLGQEELRLQTPADTLLSNSAPHTVQLTISDSE
ALLSVDGLLNASAPVLGAPLEVPYGIFLGGTGSFSLSYLRGASRPLRGCLHAATLNGRNL
LRPLTPGVHEGCAEEFSADDNVALGFSGPHSLAAFPAWSTREEGTLEFILTTRSQQAPLA
FQAGGRQGDFIYVDIFEGHLRAVVEKGQGTVLLHNSVPVADGQPHEVSVHVDAHQLEISV
DQYPTRTSNRGVLSYLDPRGSLLLGGLDAEASRHLQEHRLGLAQGAINASLLGCMEDLSI
NGQRQGLREALLTRGMGAGCRLEEDEYEEDPYGPYEAFSTLAPEAWPAVELPEPCVPEAG
LPPIFANFTQLLTVSPLVVAEGGTAWLEWRHVQPTLDLSEAELRKSQVLFSVSRGARHGE
LELDIPGAQARKMFTLLDVVNRKARFVHDGSEDTSDQLMLEVSVTARGPVPSCLRRGQTY
ILPIQINPVNDPPHIIFPHGSLMVILEHTQKPLGPEVFQAYDPDSACEGLTFQLLGTPTG
LPVERRDQPGEPATEFSCRELEAGSLVYVHRSGPAQDLTFRVSDGLQASPPATLKVVAVR
PTIQIRHNTGLRLAQGSAAPVLPANLSVETNAVGQDVSVLFRVTEALKFGELQKQGAGGA
EGAEWRATQAFHQRDVEQGRVRYLSTDPQHRTEDAMENLALEIQVGQETLSNLSFPVTIQ
RATVWLLRLEPLNTQNTQQEALTTAHLEATLEEEEAGPSPTTFHYEVVQAPRKGNLRLQG
TRLSDGQGFTQDDLQAGRVTYGATARTSETVEDTFRFRVTAPPHFSPLYTFSIHIGGDPD
APVLTNILLSVPEGGEGILSADHLFVKSLNSASYLYEVMERPRHGRLVWRGSQDKATVVT
SFTNDDLLQGRLVYQHDNSETTEDDIPFVATRQSDGSGGMAWEEVRGVFRVAIQPVNDHA
PVQTISRVFHVARGGRRLLTTDDVAFSDADSGFADTQLVLTRKDLLFGSIVAVDEPTRPI
YRFTQEDLRKRRVLFVHSGADRGWIQLQVSDGQHQATALLEVQASEPYLHVANGSSLVVP
QGGQGTIDTAVLHLDTNLDIRSGDEVRYRVTAGPHWGQLLRAGQPATAFSQQDLLDGAIL
YSHNGSLSPRDTLAFSVEAGPVHTEATLHVTIALEGPLAPLHLVQHKKIYVFQGEAVEIR
KDQLEAAQEAVPPTDIVFSVKTPPRAGYLVMLSHSAPAAQPPSLDPVQSFSQEAVDAGRV
LYLHSRPEAWTDAFSLDVASGLGAPLEGVRVELEVLPAAIPLETQNFSVPEGGARTLAPP
LLRVTGPFFPTLPGLGLRVLEPPQHGALRREEAPQEGSLSAFSWKEVEQQLIRYVHDGSE
TLTDSFVLVANASGMDRQSHPAAFTVTILPVNDQPPILTTNTGLKMWEGATVPFPPEALR
GTDSDSGPEDLVYTIEQPSNGRVVLRAAPGTEVHSFTQAQLDGGLVLFSHRGGLDGGFRF
SLSDGEHVSPGHFFHVVAQKQLLLSLEGSRTLTVCPGSVQPLSSQSLRASSSAGTDPRRL
LYRVVQGPQLGRLFHAQQGSTGDALVNFTQAEVYAGNVLYEHEMPPEPFWEVHDVLELQL
SSPPAPDVATTLAVAVSFEAACPQRPSRLWRNKGLWVPEGQRAEITTAALDASNLLASIP
SPQRPEHDVLFQITQFPTRGQLLVSEEPLHAGRPHFLQSELAAGQLAYAHGGGGTQQDGF
RFRAHLQGPAGASVSGPQTSEAFAITVRDVNERPPRPQASTPLRLTRGSRAPVSRAQLSV
VDPDSAPAEIEYEVQRAPLNGFLSLAGAGPGPVARFTQADVDAGRLAFVANGSSVAGIMQ
LSASDGASPPVPMSLAVDVLPSAIEVQLRAPLEVPQALGRSSLSRQQLRVVSDRDEPDAA
YRLTRGPRFGQLLVAGQPAATFSQLQVDQGEVVFAFTNFSSSCDHFSILALARGANASAT
VNVTVRALLRVGAGGPWPQGATLRLDSTVLDAGELANRTGSVPRFRLLAGPRHGRVVRVP
RAGTEPRDSQLVEQFTQQDLEDGRLGLEVGRPEGQSPSPTGDSLTLELWAQGVPPAVASL
DFDTEPYDAARPYSVALLSLPEPAPTEARKPESSTPTGEPGPFASSPVPTAASGGFLGLL
EASMFSVIIPVCLVLLLLALILPLLFYLRKRNKTGKHDVQVLTAKPRNGLASDTETFRKV
EPGQAIPLTAVPSQGPPPGGQPDPELLQFCRTPNPALKNGQYWV
NT seq
6975 nt
NT seq
+upstream
nt +downstream
nt
atgcgctggggccagcagcccgcgcctccagctcctgccctggccctggctttgaccttg
gctatgttggccagatcctcatctgcagcctccttcttcggtgagaaccacctggaggtg
cccgtggccacagctctgaccgacatagacctccagctccagttctccacgtcccagcct
gaagccctgcttctcctggcagcaggccaggctgaccacctcctcctgcagctccactct
ggatacctacaggtcagactcacgctgggccaggaggagctgaggctgcagacgccggct
gacacgctgctgagcaactccgccccccacaccgtgcagctgaccatttcagacagcgag
gccttgctgtccgtcgatgggctcctgaacgcctcagcccccgtcctcggagctcccctg
gaggtcccctatgggatcttcctggggggcaccgggagctttagcctgtcctacctgagg
ggagctagccggcccctgaggggttgcctccacgctgccaccctcaatggccgcaacctg
ctccgaccactgaccccaggcgtgcacgagggctgcgctgaagagttttctgctgatgac
aacgtggctctgggcttctctgggccccactcgctggcggccttccctgcctggagcact
cgggaggaaggcaccctggagtttatactcaccactcggagccaacaggcgcccctggcc
ttccaggcagggggccggcagggggatttcatctacgtggacatatttgagggccatctg
cgggctgtggtggagaagggccagggcacggtattgctccacaacagcgtgcctgtggcc
gatgggcaaccccatgaagtcagcgtccacgtggatgctcaccagctggaaatctccgtg
gaccagtaccccacacggacttccaaccgtggggtcctcagctatctggacccacgcggc
agtctcctcctgggggggctggatgccgaggcctctcgccatctccaggagcaccgcctg
ggcctggcccagggggccatcaacgcctccctgctaggctgcatggaggacctcagcatc
aacggccagaggcagggactccgggaagccttgctgacgcgcggcatgggggctggctgc
cggctggaggaagatgagtatgaggaggacccctacggcccgtatgaagctttctccacc
ctggcgcccgaggcttggccggccgtggagctgcctgagccctgcgtgcctgaggcgggg
ctgcctcctatctttgccaatttcacccaactgctgaccgtcagcccgctggtggtggcc
gagggtggcacggcctggctcgagtggcggcatgtgcagcccacgctggacctgagcgag
gccgagctgcgcaaatcccaggtgctgttcagcgtgagccgcggggcacggcacggtgag
ctcgagctagacatccccggtgcccaggcacggaaaatgttcaccctcctggacgtggtg
aaccgcaaggcccgcttcgtccacgatggctctgaggacacctccgaccagctgatgctg
gaggtgtctgtgactgccagggggcctgtgccctcctgccttcggaggggccaaacctac
attctgcccatccagataaaccccgtcaatgacccaccccatatcatcttcccacatggc
agcctcatggtgatcctggaacacacacagaagccgctggggcccgaggttttccaggct
tatgacccagactccgcctgcgaaggcctcaccttccagctccttggcacccccaccggc
ctccccgtggagcgccgagaccagccgggggagccagcaactgagttctcctgccgggag
ctggaggcgggcagcctcgtctacgtccaccgaagtgggcccgcccaggacctgacgttc
cgggtcagtgacgggctgcaggccagccctcccgccacgctgaaggtggtggccgtccgg
cccaccattcagatccgccacaacacagggctgcgcctggcccagggctccgctgcacct
gtcttgcccgccaacctgtcagtggagaccaatgccgtggggcaggatgtgagcgtgctg
ttccgagtcaccgaggccctgaagtttggggagctgcagaagcagggggcaggcggggcc
gagggtgctgagtggcgggccacacaggcattccaccagcgggatgtggagcagggccgc
gtgagatacctgagcactgacccacagcatcgcacagaggacgccatggagaacctggcc
ctggagatccaggtgggccaggagaccctgagcaatctgtccttcccagtgacaatccag
agagccacggtgtggctgctgcggctggagccactgaacactcagaacacccagcaggag
gcgctcaccaccgcccacctggaggccaccctggaggaggaggaggcaggccccagcccc
accaccttccactatgaggtggttcaggcccccaggaagggcaatcttcggctacagggc
acacggctgtcagacgggcagggcttcacccaggatgacctgcaagccggtcgggtgacc
tatggggccacagcacgcacctcagagacagtcgaagacaccttccgcttccgtgtcaca
gctccgccgcacttctccccgctctacaccttctccatccacattggtggtgacccagat
gctcccgtgctcaccaacatcctcctctcagtgcccgagggtggtgagggcatcctctcg
gctgaccacctcttcgtcaagagtctcaacagtgccagctacctgtatgaggtcatggag
cggccccgccatgggaggttggtttggagggggtcacaggacaaggccactgtggtgaca
tccttcaccaacgacgacctgctgcagggccggctggtataccagcatgacaactccgag
accacagaagatgacatcccctttgtggcgacccgccagagtgacggcagcggtggcatg
gcctgggaggaggtgcgaggtgtcttccgcgtggccatccagcccgtaaacgaccacgct
cctgtgcagaccatcagtcgcgtcttccacgtggcccggggtgggcggcggctgctgaca
acagacgatgtggcctttagtgacgccgactcgggctttgctgacactcagctggtactg
acccgcaaggaccttctcttcggcagtatcgtggctgtggatgagcccacgcggcccatc
taccgcttcacccaggaggacctcaggaagaggcgagtcctgtttgtgcactcgggggcc
gaccgcggctggatccagctgcaggtgtccgatgggcagcaccaggccacagcgctgctc
gaggtgcaggcctcggagccctacctccatgtggccaatggctccagcctcgtggtccct
caaggaggccagggcaccatcgacaccgctgtgctccacctggacaccaacctggacatc
cgcagtggggatgaggtccgctaccgtgtcacagccggcccacactgggggcagctgctc
cgggccggccagccagccacggccttctcccaacaggacctgctggacggggctattctc
tacagccacaatggcagcctcagccctcgagacaccctggccttctctgtggaggcaggg
cctgtgcacacagaggccaccctgcatgtcaccattgccctggaggggccactggcccca
ctgcatctggtccagcacaagaagatctacgtcttccagggggaggcggttgagatcaga
aaggatcagctggaggcagcccaggaggcagtgccacccacggacatcgtgttctccgtg
aagacgcccccgcgtgccggctacctggtgatgctgtcccacagcgccccagcggcccag
ccgcccagcttggacccagtgcagagcttctctcaggaggcggtggacgccggccgcgtg
ctctacctgcactcccgccccgaggcctggaccgacgccttctccctggacgtggcctcg
ggcctgggtgctccccttgagggcgtccgcgtggagctggaggtgctgcccgctgcgatc
ccactggagacccagaacttcagcgtccctgagggcggcgcccgcacgctggccccccca
ctgctccgcgtcacggggcctttcttccccacgctgccgggccttggcctgcgggtgctg
gagccgccccagcacggggccctgcggagagaggaggctcctcaggaggggtcactcagc
gccttctcctggaaagaggtggaacagcagctgatccgctacgtgcacgacgggagtgag
acgctgacagacagcttcgtcctagtggctaatgcctcagggatggaccgccagagccat
cccgcggccttcaccgtcaccatcctgccggtcaatgaccaaccccccatcctcaccaca
aacacaggcctgaagatgtgggagggggccacggtgcccttccctccggaggcccttagg
ggcacagacagtgactcaggaccggaggacctggtctacaccatcgagcagcccagcaac
gggcgggtggtgctgcgggcggcgccgggcacggaggtccatagcttcacccaggcccag
ctagacggcgggctcgtgctgttctcgcacagaggaggcctggacggcggcttccgcttc
agcctctccgacggtgagcatgtttcccctggacacttcttccacgtagtggcccagaag
cagctgctcctctccctggagggcagccggacgctgaccgtgtgcccagggtcggtccag
ccgctcagcagccagagcctgagagccagctccagtgcaggcactgacccccggcgcctg
ctctaccgtgtggtgcagggcccccagctgggccggctcttccacgcccagcagggcagc
actggggatgccctggtgaacttcactcaggccgaggtgtatgctgggaatgttctatat
gagcacgagatgcctcctgagcccttctgggaggtccatgatgtcctggagctccagctg
tcgtcaccccccgcccctgatgttgccaccacccttgctgtggccgtgtctttcgaggct
gcctgtccccagcgccccagccgcctctggaggaacaaaggtctctgggtccccgaaggc
cagcgggccgagatcaccacggctgccctcgatgcctccaacctcctggccagcattccg
tcaccccagcgcccagagcatgatgtactcttccaaatcacacagttccccacccggggc
cagctgttggtgtccgaggagcccctccacgcgggccggccccacttcctacagtccgag
ctggccgcagggcagctggcctatgcccacggcggcgggggcacccagcaggatggcttc
cgcttccgtgcccacctccagggaccggcgggggcatccgtgtcaggaccccaaacctca
gaggccttcgccatcactgtgcgggatgtgaacgagcggccgccacggccacaggcgtcc
acgccgctccggctcacccggggctcccgcgcgccggtctcccgggcccagctcagcgtg
gtggacccagactcggcgcccgcggagatcgagtatgaggtgcagcgggcccccctcaac
ggcttcctgagtctggcgggggccggcccgggacccgtggctcgcttcacgcaggccgac
gtggacgctgggcggctggccttcgtggccaacgggagcagcgtggctggcatcatgcag
ctgagcgcatccgacggggccagtcctcccgtgcccatgtccctggccgtggacgtcctg
ccgtcggccatcgaggtgcagctgcgcgcgcccctggaggtgccgcaggctctggggcgc
tcctcgctgagccggcagcagctgcgagtggtgtcagaccgggacgagcctgacgccgcc
taccgcctcacccgggggccccggttcgggcagctcctggtggccgggcagccggccgcc
accttcagccagctgcaggtagaccagggggaggtggtcttcgccttcaccaacttctcc
tcctcttgcgaccacttcagcatcctggcgctggcccgaggggccaacgcgtcagccaca
gtgaacgtcaccgtcagggctctgctgcgcgtgggggcgggcgggccgtggccccagggg
gccaccctgcgcctggactccaccgtcctagatgctggcgagctggccaaccgcacaggc
agtgtgccccgtttccggctcctggcaggaccccggcatggccgtgtggtccgcgtgccc
cgggccgggacggagcccagggacagccagcttgtggagcaattcacccagcaggacctc
gaggacggaaggctggggctggaggtgggcaggccggagggtcagtccccaagccccacg
ggtgacagtctcacactggagctgtgggcacagggtgtcccccctgctgtggcctcactg
gactttgacactgagccttacgatgcggcccgaccctacagcgtggccctgctcagtctc
cccgagcctgctcccacagaagcaaggaaaccagagagcagcacccccacgggggagcca
ggcccgttcgcctccagccccgtgcccaccgcggccagtgggggcttcctgggcttgctg
gaggccagcatgttcagtgtcatcattcccgtgtgcctggtcctcctgctcctggcactc
atcctgcccctgctcttctacctccgcaaacgcaacaagacgggcaagcatgacgtccag
gtcctgactgccaagccccgcaacggcctagccagtgacaccgagaccttccgcaaggta
gagccaggccaagccatcccgctcacggcagtgcccagccaggggcccccaccggggggc
cagcccgacccagagctgctgcagttctgccggacacccaaccccgctctcaagaatggc
cagtactgggtgtga
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integrated database retrieval system
