Ursus arctos (brown bear): 113241173
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Entry
113241173 CDS
T05909
Symbol
COL4A5
Name
(RefSeq) collagen alpha-5(IV) chain
KO
K06237
collagen type IV alpha
Organism
uah
Ursus arctos (brown bear)
Pathway
uah04151
PI3K-Akt signaling pathway
uah04382
Cornified envelope formation
uah04510
Focal adhesion
uah04512
ECM-receptor interaction
uah04820
Cytoskeleton in muscle cells
uah04926
Relaxin signaling pathway
uah04933
AGE-RAGE signaling pathway in diabetic complications
uah04974
Protein digestion and absorption
uah05146
Amoebiasis
uah05165
Human papillomavirus infection
uah05200
Pathways in cancer
uah05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
uah00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
113241173 (COL4A5)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113241173 (COL4A5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113241173 (COL4A5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
113241173 (COL4A5)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
113241173 (COL4A5)
09154 Digestive system
04974 Protein digestion and absorption
113241173 (COL4A5)
09158 Development and regeneration
04382 Cornified envelope formation
113241173 (COL4A5)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
113241173 (COL4A5)
09162 Cancer: specific types
05222 Small cell lung cancer
113241173 (COL4A5)
09172 Infectious disease: viral
05165 Human papillomavirus infection
113241173 (COL4A5)
09174 Infectious disease: parasitic
05146 Amoebiasis
113241173 (COL4A5)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
113241173 (COL4A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
uah04147
]
113241173 (COL4A5)
00536 Glycosaminoglycan binding proteins [BR:
uah00536
]
113241173 (COL4A5)
Exosome [BR:
uah04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
113241173 (COL4A5)
Glycosaminoglycan binding proteins [BR:
uah00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113241173 (COL4A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
113241173
NCBI-ProteinID:
XP_048069479
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Position
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AA seq
1685 aa
AA seq
DB search
MKLRGVSLAAGLFLLALSLWGQPAEAAACYGCSPGSKCDCTGVKGEKGERGFPGLEGHPG
LPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQG
IPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGLKGEPGSIIMSSLPGPKGNPGYPGPPG
IQGPAGPTGLPGPTGPPGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGP
PGQISEQKRPIDVEFQKGDQGLPGDRGPPGPPGIRGPPGPPGGVKGEKGEQGEPGKRGKP
GKDGENGQPGIPGLPGDPGYPGEPGRDGEKGQKGDIGPTGPPGLVIPRPGTGVTVGEKGN
IGLPGLPGEKGQRGFPGIQGPPGLPGPPGTAVTGPPGPPGFPGERGQKGDEGPPGISIPG
SPGLDGQPGAPGLPGPPGPPGPHIPPSDEICEAGPPGPPGSPGDRGLQGEQGVKGDKGDT
CFNCIGTGVSGPPGQPGLPGLPGPPGSLGFPGQKGEKGHAGLTGPKGLTGIPGAPGPPGF
PGSKGDPGDILTFPGMKGDKGELGSPGAPGLPGLPGTPGQDGLPGLPGPKGEPGGIAFKG
ERGPPGNPGLPGLPGNRGPMGPVGFGPPGPVGEKGIQGVAGNPGQPGIPGPKGDPGQTIT
QPGKPGLPGNPGRDGEVGLPGDPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPGPKGFPGI
PGPPGAPGTPGRIGLEGPSGPPGFPGQKGEPGLGLPGPPGPPGLPGFKGTLGPKGDRGFP
GPPGLPGRTGLDGLPGPKGDVGPNGQPGPMGPPGLPGVGVQGPPGPPGIPGPVGQPGLHG
IPGEKGDPGPPGFDVPGPPGERGSPGIPGAPGPMGPPGTPGLPGKAGASGFPGAKGEMGI
MGPPGPPGPLGIPGRSGVPGLKGDDGLQGHPGPPGPAGEKGGKGEPGLPGPPGPVDPDLL
GSKGEKGDPGLPGIPGVSGPKGYQGLRGDPGQPGLSGQPGLPGPSGPKGNPGLPGKPGLT
GPPGLKGSIGDMGFPGPQGVKGSSGPPGVPGQPGSPGLPGQKGEKGDPGVSGIGLPGLPG
PKGEPGLPGYPGNPGIKGSRGDTGLPGLPGTPGAKGQPGLPGFPGTPGLPGAKGINGPPG
NPGLPGEPGPVGGGGRPGPPGPPGEKGNPGQDGIPGPAGQKGEPGQPGFGIPGPPGLPGL
SGQKGDGGLPGIPGNPGLPGPKGEPGFQGFPGVQGPPGPPGTPGPALEGPKGNPGPQGPP
GRPGLPGPEGPRGLPGNGGIKGERGNPGQPGQPGVPGLKGDQGPPGQQGNPGRPGLNGMK
GDPGLPGVPGFPGMKGPSGIPGSAGPEGDPGLVGPPGPPGLPGPSGQSIIIKGDVGPPGI
PGQPGLKGLPGLPGPQGLPGPIGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGTRGLDGP
PGPDGMQGPPGPPGTSSIAHGFLITRHSQTTDAPQCPHGTVQIYEGFSLLYVQGNKRAHG
QDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPMSMEPLKGRSIQPF
ISRCAVCEAPAVVIAVHSQTIQIPRCPQGWDSLWIGYSFMMHTSAGAEGSGQALASPGSC
LEEFRSAPFIECHGRGTCNYYANSYSFWLATVDVSDMFSKPQSETLKAGDLRTRISRCQV
CMKRT
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgcgtggagtcagcctggctgccggcttgttcttactggccctgagtctttgg
gggcagcctgcagaggctgcggcttgctatgggtgttctccaggatcaaaatgtgactgt
actggtgtaaaaggagaaaagggggagagaggatttccaggtttggaaggccatccaggt
ttgcctggatttccaggtccagaagggcctccagggcctcggggacaaaagggtgatgat
ggaattccagggccaccaggaccaaaagggatcagaggtcctcctggacttcctggattt
ccagggacaccaggtcttcctggaatgccaggccatgatggggccccgggacctcaaggt
atccctggatgcaatggaaccaagggagaacgtggatttccaggcagtcccggttttcct
ggtttacagggtcctccaggacctccagggatcccaggtttgaagggagaaccaggcagt
ataattatgtcatcactgccaggaccaaagggtaatccaggatatccaggtcctcctgga
atacaaggcccagctggtcccactggtttaccagggccaactggtcccccaggaccacca
ggtttgatgggccctcctggtccaccaggacttccaggaccaaaggggaatatgggctta
aatttccagggacccaagggtgaaaagggtgagcaaggtcttcagggcccccctgggcca
cctggacagatcagtgaacagaaaagaccaattgatgtagagtttcagaaaggagatcag
ggacttcctggtgaccgagggcctcctggacctccagggatacgtggtcctccaggtcct
ccaggtggtgtgaaaggtgagaagggtgagcaaggagagcctggcaaaagaggtaaaccg
ggcaaagatggagagaatggccaaccaggaattccaggtttgcctggtgatcctggttac
cctggtgaaccaggaagggatggagaaaagggccaaaaaggtgacattggcccaactggg
cctcctggacttgtgattcctaggcctgggaccggtgtaactgtaggagaaaaaggaaac
attgggttacctggcttgcctggagaaaaaggacagcgaggatttcctggaatacaaggt
ccacctggtcttcctggacctccaggaactgcagttacaggtcctcctggcccccctggc
tttcctggagaaaggggccagaaaggtgatgaaggtccacctggaatttctattcctgga
tctcctggacttgatggacagcctggggctcctggacttccagggcctcctggccctcct
ggccctcacatccctcctagtgatgagatatgtgaagcaggccctccaggccctccggga
tctccaggtgatagaggactccaaggagaacaaggagtgaaaggtgacaaaggtgacacc
tgcttcaactgtattggaactggtgtttcagggcctccaggtcaacctggtctgcctggt
cttccaggtcctccaggatctcttggtttccctggacagaagggagaaaaaggacatgct
ggtctaaccggtcccaaaggattaacaggcataccaggagctccaggtcctccaggcttt
cctggatctaaaggtgatcctggtgacatcctcacttttccaggaatgaagggtgacaag
ggagagttgggttccccaggagcccctgggcttcctggtttacccggtacccctggacag
gatggactgccagggcttcctggccccaaaggagaacctggtggaattgcttttaagggt
gaaagaggtccccctgggaatccaggcttgccaggtctcccagggaatagggggcctatg
ggccctgtgggttttggccctccaggcccggtaggtgaaaaaggcatacaaggtgtggca
ggaaatccaggccagccaggaataccaggtcctaaaggtgatccaggtcagaccataacc
cagccagggaagcctggcctgcctggtaacccaggcagagatggtgaagtaggtcttcca
ggtgaccctggacttcccggccagccaggcttgccaggaatacctggtagtaaaggagaa
ccaggtatccctggaattgggcttcctggaccacctggtcccaaaggttttcctggaatt
ccaggaccgccaggagcacctgggacacctggaagaattggtctagaagggccttctggg
ccaccaggctttccaggacagaagggagaacctggacttgggctgcctgggccacctgga
cccccaggactcccaggtttcaaaggaacacttggtccaaaaggggatcgtggtttccca
ggacctccaggtcttccaggacgcactggcttggatgggctccctggaccaaaaggtgat
gttgggccaaatggacaacctgggccaatgggacctcctgggcttccaggagtaggtgtt
cagggaccaccagggccaccggggattcctggaccagtaggacaacctggcctgcatgga
ataccaggagagaagggagatccagggcctcctgggtttgatgttccaggaccccctgga
gagagaggcagtccagggattcctggagcacctggtcctatgggacccccaggaacacca
gggcttccaggaaaagcaggtgcctctggatttccaggtgccaaaggtgaaatgggtatc
atgggacctccaggcccaccaggacctttgggaattcctggcaggagtggtgttcctggt
ctcaaaggtgatgatggtttgcagggtcacccaggacctcctggccctgcaggagaaaaa
ggtggtaaaggagagcctggccttccaggcccacctggaccagtggatccagatctgctg
ggctcaaaaggagagaaaggggaccctggcttaccaggtattcctggagtttcagggcca
aaaggttaccagggtttgcgtggagacccagggcaacctggactgagtggacaacctgga
ttaccaggaccatcaggtcccaaaggtaaccctggtctccctgggaagccaggacttaca
ggacctcctggacttaaaggaagcataggtgacatgggttttccaggacctcagggtgtg
aaagggtcttctggacctcctggagttcctggacagcctggctccccaggattacctgga
cagaaaggagaaaaaggtgatcctggtgtttcaggcattggtctcccaggtcttcccggc
ccaaagggtgaacctggtctgcctggatatccaggaaaccctggaatcaaaggttctagg
ggagatactggtttgcctggattaccagggacccctggagcaaaaggacaaccaggcctt
cctggattccctggaaccccaggacttcctggagcaaaaggtattaatggtcctcctggg
aaccctggccttccaggagaacctggtcctgtaggtggtggaggtcgtcctggaccacca
gggcctccaggtgaaaaaggcaacccaggtcaagatggtattcctggaccagctggacag
aagggtgaaccaggtcaaccgggctttggaatcccaggaccccccggactcccaggactt
tctggtcaaaagggtgatggaggattacctggcattccaggaaaccctggccttcctggt
ccaaagggagaaccaggctttcagggtttccctggtgtgcaaggtcccccaggccctcct
ggtactccaggtccagctctggaaggccctaaaggcaaccctgggccccagggtcctcct
gggagaccaggtctaccaggtccagaaggtccccgaggtctccctggaaatggaggtatt
aaaggagagagaggaaacccaggccaacctgggcaacctggtgtgcctggtttgaaagga
gatcaaggaccaccaggacaacagggtaatcctggtcgaccaggtctcaatggaatgaaa
ggagatcctggtctccctggtgttccaggatttccaggcatgaagggacccagtggaata
cctggttcagctggccctgagggggatccaggacttgttggccccccaggtccccctgga
ttacctggtccttcaggacagagtattataatcaaaggagatgttggtccaccagggatc
ccaggccagcctggattaaaaggtctaccaggactaccaggacctcaaggcttaccaggt
ccaattggccctccaggagatccaggacgcaatggactccctggctttgatggtgcagga
gggcgcaaaggagacccaggtttgccaggccagccaggtacccgtggtttggatggtccc
cctggaccagatggaatgcaaggtcccccaggtcctccaggaacttcctctattgcccat
ggattcctcatcacacgtcacagccagacaacagatgcaccacaatgcccacatggaact
gtacaaatttatgaaggcttttctctcctgtatgttcaaggaaataaaagagctcacggt
caagacttggggacggctggcagctgccttcgtcgcttcagtaccatgcctttcatgttc
tgcaacatcaataacgtttgcaactttgcttcaagaaatgactattcttactggctgtcc
accccagagcccatgccaatgagcatggagcccctgaagggccggagcatccagccattt
attagtcgatgtgcagtatgtgaagctccagccgtggtgatcgcagttcacagtcagacc
atccagattccccgttgtcctcagggatgggattctctctggattggctattctttcatg
atgcacacaagcgcaggagcagagggctcaggccaagccttggcctcccctggttcctgc
ttggaagagtttcgttcggctcccttcattgaatgtcatgggcggggtacctgtaactac
tatgccaattcctacagcttttggctagcaactgtagatgtgtcagacatgttcagcaaa
cctcagtcagaaacgctgaaagcaggagacttgaggacacgtattagccgatgtcaagtg
tgcatgaagaggacataa
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