KEGG   Ursus arctos horribilis (North American brown bear): 113242535
Entry
113242535         CDS       T05909                                 
Symbol
KDM5B
Name
(RefSeq) lysine-specific demethylase 5B
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
uah  Ursus arctos horribilis (North American brown bear)
Brite
KEGG Orthology (KO) [BR:uah00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:uah01009]
    113242535 (KDM5B)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:uah03036]
    113242535 (KDM5B)
Enzymes [BR:uah01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     113242535 (KDM5B)
Protein phosphatases and associated proteins [BR:uah01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     113242535 (KDM5B)
Chromosome and associated proteins [BR:uah03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    113242535 (KDM5B)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD_2 zf-PHD-like Lipoprotein_20
Other DBs
NCBI-GeneID: 113242535
NCBI-ProteinID: XP_026336417
LinkDB
Position
Unknown
AA seq 1544 aa
MEPATALPPGPRPALPLGGPGPLGEFLPPPECPVFEPSWEEFADPFAFIHKIRPIAEQTG
ICKVRPPPDWQPPFACDVDKLHFTPRIQRLNELEAQTRVKLNFLDQIAKYWELQGSTLKI
PHVERKILDLFQLNKLVAEEGGFAVVCKDRKWTKIATKMGFAPGKAVGSHIRGHYERILN
PYNLFLSGDSLRCLQKPNLSTDTKDKEYKPHDIPQRQSVQPSETCPPARRAKRMRAEAMN
IKIEPEETAEARTHNLRRRMGCPATKCENEKEMKGIVKQEPIEKKEYIVESEKEKPKSRS
KKTTNAVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLAQE
CSKPQEAFGFEQAARDYTLRTFGEMADAFKSDYFNMPVHMVPTELVEKEFWRLVSTIEED
VTVEYGADIASKEFGSGFPVRDGKIKLSPEEEEYLDSGWNLNNMPVMEQSVLAHITADIC
GMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLENVMKKLAPE
LFVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAV
NFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQKDMAIMIE
DEKALRETVRKLGVIDSERMDFELLPDDERQCIKCKTTCFMSAISCSCKPGLLVCLHHVK
ELCSCPPYKYKLRYRYTLDDLYPMMNALKLRAESYNEWALNVNEALEAKINKKKSLVSFK
ALIEESEMKKFPDNDLLRHLRLVTQDAEKCASVAQQLLNGKRQTRYRSGGGKSQNQLTVN
ELRQFVTQLYALPCVLSQTPLLKDLLNRVEDFQQHSQKLLSEEMPSAAELQDLLDVSFEF
DVELPQLAEMRVRLEQARWLEEVQQACLDPSSLTLDDMRRLIDLGVGLAPYSAVEKAMAR
LQELLTVSEHWDDKAKSLLKARPRHSLNSLATAVKEIEEIPAYLPNGAALKDSVQRARDW
LQDVEALQVGGRVPVLDTLIELVTRGRSIPVHLNSLPRLELLVAEVQAWKECAANTFLTE
NSPYSLLEVLCPRCDIGLWGLKRKQRKFKEPLPSGKKKSTKLESLSDLERALSESKETAS
AMATLGEARLREMEALQSLRLANEGKLLSPVQDLELRVCLCQKAPAAPMIQCELCRDAFH
TSCVAVPSISQGPRIWLCPHCRRSEKPPLEKILPLLASLQRIRVRLPEGDALRYMIERTV
NWQHRAQQLLSSGNLKSVQDRVGSGLWYSRWQASAGQVSETNKVSQPTGTTSFSLPEDWD
SRASYVHSPFSTGRSCIPLHGISPEVNELLMEAQLLQVSLPEIQELYQTLLARPTPAQQT
DRSSPARPSSEKNECCRGKRDGINSLERKLKRRLEREGLSSDRWDRVKKMRTPKKKKIKL
SHSKDMNSFKLERERSYELVRSAETHSLPSDTSYSEQEDSEDEDAICPAVSCLQPEGDEV
DWVQCDGSCNQWFHQVCVGVSPEMAEKEDYICVRCTVKDAPSRK
NT seq 4635 nt   +upstreamnt  +downstreamnt
atggagccagccaccgcgctgcccccgggccctcgcccggcgctgcccctcgggggcccg
ggcccgctgggcgagttcctgcctccccccgagtgcccggtcttcgagcccagctgggaa
gagttcgcggaccccttcgctttcatccacaagatccggcccatagccgagcagactggg
atctgtaaggtgcggccgccgccggattggcagccaccatttgcatgtgatgttgataaa
cttcattttaccccacgtatccagaggctgaatgaattggaggctcaaactcgagtaaaa
ctgaatttcttggaccagattgcaaagtattgggagttgcagggaagtactctgaaaatt
ccacatgtggagaggaagatcttggacttgtttcagctcaataagttagttgcagaagaa
ggtggatttgcagttgtttgcaaggatagaaaatggaccaaaattgccaccaagatggga
tttgctcctggcaaagctgtgggctcccatatcagagggcattatgaacgcatcctcaat
ccctacaacttgtttctgtcaggagacagtttgaggtgtctgcagaagccaaacctgagc
acagacacgaaggacaaggagtacaaacctcatgatattccccagaggcagtctgtgcag
ccctcagaaacatgccccccagcccgacgagcaaaacgcatgagagcagaggccatgaat
attaaaatagaaccagaagagacagcagaagccagaactcataacctgagaagacgaatg
ggttgtccagctacaaaatgtgaaaatgagaaagaaatgaaaggcatcgtcaagcaagaa
cccattgagaagaaagagtacattgtagaaagcgagaaggaaaaacccaagagccgatct
aaaaaaaccaccaatgctgtggatctgtatgtctgcctcttatgcggcagtggcaacgat
gaggaccggcttctcttgtgtgacgggtgtgacgacagttaccacaccttttgcttgatc
cctcctctccatgatgttcccaagggagactggaggtgtcctaagtgtttggctcaggag
tgtagtaagccacaagaagcatttggctttgaacaagcagccagggactatacccttcgt
acttttggggaaatggcagatgcattcaaatctgattatttcaacatgccagtccatatg
gttcccacagaactagttgagaaagaattttggcgactggtaagcactattgaagaggat
gtcacagtagaatatggagccgatatcgcctcaaaagaatttggcagtggcttccctgtc
cgagatgggaaaatcaagctgtcacctgaggaggaggagtatcttgatagtggctggaat
ttgaacaatatgccagtaatggagcagtctgtccttgctcacattactgctgatatatgt
ggcatgaaacttccttggttgtatgtgggaatgtgcttttcttcattctgttggcatatt
gaagaccactggagctattcaattaactacctgcactggggtgagccaaaaacctggtat
ggagtcccggggtatgctgccgagcagctagaaaatgtaatgaagaaactagctccagag
ctctttgtgtcccagccagatcttctccatcagcttgtgaccatcatgaaccccaatacc
ctgatgactcatgaagtgcctgtttaccgaactaatcagtgtgctggggagttcgtgatt
acatttccaagagcctaccacagtggttttaatcaaggttttaattttgctgaggctgtt
aacttctgcactgttgattggctgccattaggccgccagtgtgtggagcattatcgcttg
cttcaccgctattgtgtattttcccacgatgagatgatttgcaagatggcttccaaggct
gatgtactagatgtcgtagtggcttcaactgttcagaaagacatggccattatgattgag
gatgagaaggctttaagagaaactgtccgtaaattgggagtaattgattcggaaagaatg
gattttgagctgttgccagatgatgagcgtcagtgtataaaatgtaaaaccacatgcttc
atgtctgccatctcctgttcttgtaaacctggcctgcttgtttgcctgcatcatgtaaaa
gaattgtgttcctgtcctccttataaatataaactgaggtatagatacactctggatgat
ctctaccccatgatgaatgcactgaaacttcgagcagaatcttacaacgaatgggccctg
aatgtgaatgaagctttggaggccaagattaacaaaaagaaaagccttgtcagctttaag
gctttaattgaagaatctgaaatgaagaaattcccagacaatgatcttctgcgtcacctt
cgcttagtcacacaggatgcagagaagtgtgcctctgttgcacagcagctgcttaatggc
aaaaggcaaactagataccgatctggtggaggaaaatcccaaaatcagttgacagtgaat
gagctccgacagtttgtgacacagctgtatgcacttccatgtgtcctcagtcaaacacct
ttgctaaaggatctcttgaatcgtgtagaagatttccaacagcacagccagaaattgctc
tctgaggaaatgcccagtgctgcagagctgcaagacttgctagatgtcagctttgaattt
gatgttgaacttccacagcttgctgagatgcgtgtccgtctggagcaggcccgttggcta
gaagaggtgcagcaagcttgcctagaccccagctcccttacattagatgatatgagacgt
ctcatagacctaggggtgggtctggccccatattcagcagtggagaaagccatggcccgg
cttcaggaactgctcacagtgtcagagcactgggatgacaaagccaagagtcttctcaag
gccagacctcggcattcactgaacagccttgctacagcagttaaggagattgaggagatc
cccgcatatttgccgaatggtgcagctctgaaagactccgtgcagagagccagggactgg
cttcaggatgtggaggccctgcaggttggaggacgtgtgccagtgttagacacactcata
gaacttgttacccgaggccgatctatcccggtacatctgaattctttaccaagactggaa
ttactagtagctgaggttcaggcttggaaagaatgtgctgctaatacattcttgactgag
aattctccatattctctcttagaggtgctgtgtcctcgatgtgacattggcctttgggga
ttgaagaggaagcagagaaagttcaaggagcccttgccaagtggaaagaagaaaagcacc
aaactagagagtctgagtgacctggagagagccttaagtgaaagcaaggagactgcttca
gctatggcaacacttggggaagctcgcctaagggaaatggaagccttgcagtctctcaga
ctagccaacgaagggaagttgctgtcacctgtccaagatttggaactgagagtctgcctg
tgtcagaaggccccagctgcccccatgatccagtgtgaactctgcagggatgctttccac
actagctgtgtggcggtacccagtatttcacaaggcccacgaatctggctttgtccccat
tgtcggaggtcagagaaacctccgttagagaaaattctgcccctgctggcctccctgcag
cgtatccgagtccgccttcctgagggagatgcacttcgatatatgatcgaaagaaccgtg
aactggcaacacagagcccagcagctgctttcatcagggaatctcaaatctgtgcaggat
cgagtgggctcaggactgtggtatagcagatggcaagcttcagcaggacaggtgtccgag
acgaacaaggtgtctcagcctactggtacaacatccttttccttgcctgaggactgggac
agcagagcctcctatgtacactctcccttctccactggccggagttgtatccccctccat
ggtattagtccagaagtgaatgaactgttgatggaagcccagttgctccaggtatccctt
cctgaaattcaggaactttaccagactttacttgcaaggccaacccctgctcagcagacc
gaccgaagttcaccagctagaccgagcagtgagaagaacgagtgctgccgtgggaagcga
gatggaatcaacagtcttgagagaaaactgaagagacgcctggaaagagaaggcctctcc
agtgatcggtgggatcgagttaaaaaaatgcggacccccaaaaagaagaaaatcaaactg
agccactccaaggacatgaacagtttcaagttagagagagagcgtagctatgaattagtc
cgttctgccgaaacgcattccctgccctcagacacatcctattccgaacaggaggactct
gaggatgaagatgccatctgcccagctgtgagctgcctgcagccagaaggagatgaggtg
gactgggtccagtgtgatggcagctgcaatcagtggtttcaccaggtctgtgttggtgtt
tctccagagatggcagagaaggaagactacatctgtgtgcgctgtactgtgaaggacgca
ccaagccgaaaataa

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