Ursus arctos (brown bear): 113243008
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Entry
113243008 CDS
T05909
Symbol
SMARCA4
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
uah
Ursus arctos (brown bear)
Pathway
uah03082
ATP-dependent chromatin remodeling
uah04714
Thermogenesis
uah05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
uah00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113243008 (SMARCA4)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
113243008 (SMARCA4)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
113243008 (SMARCA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
uah03021
]
113243008 (SMARCA4)
03036 Chromosome and associated proteins [BR:
uah03036
]
113243008 (SMARCA4)
Transcription machinery [BR:
uah03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
113243008 (SMARCA4)
Chromosome and associated proteins [BR:
uah03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
113243008 (SMARCA4)
Chromatin remodeling factors
BAF complex
113243008 (SMARCA4)
PBAF complex
113243008 (SMARCA4)
GBAF(ncBAF) complex
113243008 (SMARCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
DUF2009
Motif
Other DBs
NCBI-GeneID:
113243008
NCBI-ProteinID:
XP_044233928
LinkDB
All DBs
Position
Unknown
AA seq
1647 aa
AA seq
DB search
MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG
PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGAHAGMGPPPSPMDQHSQGY
PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL
RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP
GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ
KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG
LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV
VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL
QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK
LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG
PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES
GSEEEEEEEEEEQPQPAQPPNLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV
SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE
MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA
RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH
YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE
TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD
GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG
KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK
TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR
VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESR
HCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMD
LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS
DSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQ
KKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYEL
IRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSV
RQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGS
RAKPVVSDDDSEEEQEEDRSGSGSEED
NT seq
4944 nt
NT seq
+upstream
nt +downstream
nt
atgtccactccagacccacccctgggcggaactcctcggccaggcccttcgccaggcccg
ggcccctcccctggagccatgttgggccctagcccgggtccctcaccgggctctgcccac
agcatgatggggcccagcccagggcctccctcagcaggtcaccccatcccgacccagggg
cctggagggtaccctcaggacaacatgcaccagatgcacaagccaatggagtccatgcat
gagaagggcatgtcggatgacccccgctacaaccagatgaagggcatggggatgcggtcg
ggggcccatgcagggatggggcccccgccaagccccatggaccagcactcccaaggttac
ccttcccccctgggcggctccgagcatgcctccagtccggttccagccagtggcccgtcg
tcaggcccacagatgtcctctgggccaggaggggcccccctggatggtgccgatccccag
gctttgggacagcagaaccggggcccgactccatttaaccagaaccagctgcatcagctc
agagcccagatcatggcgtacaagatgctggccagggggcagcccctccccgaccacctg
cagatggcggtgcaggggaagcggccgatgcccgggatgcagcagcagatgccaacacta
cctccaccctctgtgtccgccacgggacctggccccggccctggccctggcccgggtccg
ggtccaggaccagcacctccaaattatagcaggcctcacggtatgggagggcccaatatg
ccccccccaggaccctcaggcgtgccccctgggatgccgggtcagccccccggagggcct
cccaagccttggcctgaaggacccatggcaaatgctgctgcccccacgagcacacctcag
aagctgatccccccacagccaacgggccgcccctcacctgcaccccctgccgtcccgccc
gctgcctccccggtgatgccgccccagacgcagtcgccagggcagcctgcccagcctgcc
cccatggtgccattgcaccagaagcagagccgcatcacccccatccagaagccgcggggc
ctggaccctgtggagatcctgcaggagcgcgagtacaggctgcaggctcggatcgcacac
cgaattcaggaacttgaaaaccttcccgggtccctggccggggatttacgaaccaaagcg
accattgagctcaaggcgctcaggctgctgaacttccagaggcagctacgacaggaagtg
gtggtgtgcatgaggagggacacagcccttgagacggccctcaacgccaaggcctataag
cgcagcaagcggcagtccctgcgtgaggcccgcatcaccgagaagctggagaagcagcag
aagatcgagcaggagcgcaagcgccggcagaagcaccaggaatacctcaacagcattctg
cagcatgccaaggatttcaaagaatatcacagatcggtcacaggcaaaatccagaagctc
acgaaggcggtggccacgtaccacgccaacacggagagggaacagaagaaggaaaacgaa
agaattgagaaagaaagaatgcggagactcatggctgaagatgaggaggggtaccgtaag
ctcatcgaccagaagaaggacaagcgcttggcctacctcttgcagcagacagatgagtac
gtggctaacctcacggagctggtgcggcagcacaaggctgcccaggtcgccaaggagaaa
aagaagaaaaagaaaaagaagaaggcagaaaatgcagaaggacagacacctgcaatcgga
cctgatggcgagcctctggatgagaccagccaaatgagcgacctgccagtgaaagtgatc
cacgtggagagcgggaagatcctcacgggcaccgatgccccgaaagcagggcagctagag
gcctggcttgagatgaacccgggatatgaagtagctccaagatctgatagtgaagaaagt
ggctcagaagaagaggaggaggaggaggaggaggagcagccgcagccagcacagcctccc
aacctgcccgttgaggaaaagaagaagattccagatccagacagcgatgatgtctccgag
gtggacgcccggcacatcattgagaacgccaagcaagacgtggatgacgagtacggcgtg
tcccaggcccttgctcggggcctgcaatcctattacgccgtggcccatgctgtcactgag
agagtggataagcagtcggcgcttatggtgaatggtgtcctcaaacagtaccagatcaaa
ggcttggagtggctggtgtccctgtacaacaacaacctgaatggcatcctggctgacgag
atgggcctggggaaaaccatccagaccatcgctctcatcacgtacctcatggagcacaag
cggatcaacggaccctttctcatcatagtacctctctccacgctgtcaaactgggcatat
gaatttgacaagtgggccccctctgtggtgaaggtgtcctacaagggttctccagcagcc
agacgtgctttcgtcccccagctccgaagtggcaagttcaacgtcttgctgacgacttac
gagtacatcattaaggataagcacatccttgcgaagatccgttggaagtacatgatcgtt
gatgaaggccaccgaatgaagaaccaccattgcaagctgacacaggtcctcaacactcac
tacgtggccccccgccgcctgctgctgacgggcacaccgctgcagaacaagctccccgag
ctctgggcgctcctcaacttcctgctgcccaccatcttcaagagctgcagcaccttcgag
cagtggttcaacgcgcccttcgccatgaccggagaaaaggtggacctgaacgaggaggag
acgattctcatcatccgtcgtctccacaaagtgctgcggccctttctgctccggcggctt
aagaaagaagtcgaagcccagttgcctgagaaggtggaatatgtcatcaagtgtgacatg
tctgcactacagcgagtgctctacaggcacatgcaggccaagggggtgctgctcaccgac
ggctccgagaaggacaagaagggcaaaggtggtaccaagaccctgatgaacaccatcatg
cagctgaggaagatctgcaaccacccgtacatgttccagcacatcgaggagtccttctcc
gagcacttggggtttaccggtggcatcgtgcaagggctggacctgtaccgagcctcgggg
aagtttgagcttctcgataggattcttcccaaactccgtgccaccaaccacaaagtgctg
ctgttctgtcagatgacctccctcatgacgatcatggaagattattttgcgtatcgtggc
tttaaatacctcaggcttgatggaacgacgaaagcggaggaccggggcatgctgctgaaa
accttcaatgagcccggctccgagtacttcatcttcctgctcagcacccgcgccgggggg
ctcgggctaaacctccagtcggctgacactgtgatcatcttcgacagtgactggaacccc
caccaggacctgcaagcccaggaccgcgcccaccgcatcgggcagcagaacgaggtgcgg
gtgctccgtctctgcacggtcaacagcgtagaggagaagattctggccgcggccaagtac
aagctcaatgttgaccagaaggtgatccaggctggcatgtttgaccagaagtcctccagc
cacgagaggcgcgccttcctgcaggccatcctcgagcacgaggagcaggatgagagcaga
cactgcagcacgggcagcggcagtgccagcttcgcccacactgcccctccgccagcgggc
gtcaaccccgacttggaggagccacctctaaaggaagaagatgaagtgcccgacgacgag
acggtgaaccagatgattgcccggcacgaggaggaatttgacctgttcatgcgcatggac
ctggaccgcaggcgcgaggaggcccgaaaccccaagcggaaaccgcgcctgatggaggag
gacgagctcccgtcgtggatcatcaaggacgatgcagaggtggagcgactgacctgtgaa
gaggaagaggagaagatgttcggccgcggctcccgccatcgcaaagaggtggactacagt
gactcgctgaccgagaagcagtggctcaaggccatcgaggagggcacgctggaggagatc
gaagaggaggtccggcagaagaaatcgtctcggaagcgcaagcgggacagcgacgccggc
tcctccaccccgaccaccagcacccgcagccgtgacaaggacgacgagagcaagaagcag
aagaagcgtgggcggccacccgctgagaagctctccccaaaccctcccaacctcaccaag
aagatgaagaagatcgtggacgctgtgatcaagtacaaggacagtagtagtggacgtcag
ctcagtgaggtgttcatccagctgccctcccgtaaggagctgcccgagtactacgagctc
atccgcaagcctgtggacttcaagaagataaaggagcgcatccgcaaccacaagtaccgc
agcctcaatgacctggagaaggacgtcatgctactgtgccagaacgctcagaccttcaac
ctggagggctccctgatctacgaagactccattgtcctgcagtcggttttcaccagcgtg
cggcagaaaatagagaaagaagatgacagtgagggcgaggagagcgaggaagaggaggag
ggcgaggaggaaggctctgagtctgagtcccgctcagtcaaagtgaagatcaagctgggc
cggaaggagaaggcacaggatcggctgaaggggggccgtcggcggccgagccgcggctcg
cgggccaagccagtggtgagcgatgacgacagtgaagaggagcaggaggaggaccgctca
ggaagtggcagcgaggaagactga
DBGET
integrated database retrieval system
