Ursus arctos horribilis (North American brown bear): 113243587
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Entry
113243587 CDS
T05909
Symbol
SUPT5H
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
uah
Ursus arctos horribilis (North American brown bear)
Pathway
uah03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
uah00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
113243587 (SUPT5H)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
uah03021
]
113243587 (SUPT5H)
03019 Messenger RNA biogenesis [BR:
uah03019
]
113243587 (SUPT5H)
Transcription machinery [BR:
uah03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
113243587 (SUPT5H)
RNA polymerase I system
113243587 (SUPT5H)
Messenger RNA biogenesis [BR:
uah03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
113243587 (SUPT5H)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW
Spt5-NGN
Spt5_N
DUF3912
DUF150_C
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
113243587
NCBI-ProteinID:
XP_026338108
LinkDB
All DBs
Position
Unknown
AA seq
1087 aa
AA seq
DB search
MSDSEDSNFSEEEDSERSSDGEEAEVEEERRSVAGSEKEEEPEEEEEEEEEEEYDEEEEE
EDDDRPPKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKEEIEASNIDNVVLDEDRS
GARRLQNLWRDQREEELGEYYMKKYAKSSVGETVYGGSDELSDDITQQQLLPGVKDPNLW
TVKCKIGEERATAISLMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVKQAIE
GVGNLRLGYWNQQMVPIKEMTDVLKVVKEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQ
NTISLKMIPRIDYDRIKARMSLKDWFAKRKKFKRPPQRLFDAEKIRSLGGDVASDGDFLI
FEGNRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTESTGKEREHNF
QPGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKV
IAGRFEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELV
QLDPQTVGVIVRLERETFQVLNMYGKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIV
KVIDGPHSGREGEIRHLFRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTNFTVG
GFAPMSPRISSPMHPSAGGQRGGFGSPGGGGGGMSRGRGRRDNELIGQTVRISQGPYKGY
IGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGS
GSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAF
DDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQG
SYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSP
GGYNPHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGMCSVYLKDSE
KVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRF
LGKLLEA
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacagcgaggatagcaacttctccgaggaggaggatagcgagcgcagcagtgac
ggcgaggaggccgaggtagaggaagagcggcggagtgtagcaggcagtgagaaggaggaa
gagcccgaggaagaagaggaggaggaagaggaggaagaatatgatgaggaagaggaagag
gaagatgatgaccggcctcccaagaaaccccgccacggcggcttcattctggacgaggct
gatgtggacgatgagtatgaggatgaggaccagtgggaggacggagcagaggacattcta
gagaaagaagagatcgaagcctccaatatcgataatgttgttctggatgaagaccgttct
ggggctcgccgcctacaaaacctctggagggaccagcgagaggaagaactgggcgagtat
tacatgaagaaatatgccaagtcgtctgtgggagagacggtgtatggcggatccgatgag
ctctcggatgacatcacccagcagcagctgctcccaggagtcaaggacccaaatctgtgg
actgtcaaatgtaagattggggaggaacgggccacagccatttccttgatgcgcaagttc
attgcctaccagttcacagacacgcccctgcagattaagtcagtggtggcgccggagcat
gtgaagggctacatctacgtggaggcctacaagcagacgcacgtgaagcaggccatcgag
ggtgtgggcaacctgcggcttggctactggaaccagcagatggtgcccatcaaggagatg
acagatgtgctcaaagtcgtgaaggaggtggccaacctgaagccaaaatcctgggtccgc
ctcaagaggggcatctataaggacgacattgcccaggtggattatgtggagcccagccaa
aacaccatctccttgaagatgatcccccgcattgactacgaccgcatcaaggcccgcatg
agcttgaaagactggtttgccaaaaggaagaagtttaagcggcctcctcagaggctgttc
gacgctgagaagatcaggtctctgggcggcgatgttgcctctgatggtgacttcctcatc
ttcgaggggaaccgttacagcaggaagggctttctgttcaagagctttgccatgtctgct
gtgatcacggagggtgtgaagcccacactttctgaactggagaagtttgaggaccagccg
gagggcattgaccttgaggtggtgactgagagcacagggaaggagcgggagcacaacttc
cagcctggggacaatgtggaggtgtgtgagggcgagctcatcaacctgcagggcaagatc
ctcagcgtggatggcaacaagatcaccatcatgcccaagcacgaggacctcaaggacatg
ctcgagttcccggcccaggaacttcggaagtactttaaaatgggggaccacgtgaaggtg
attgctggccgatttgagggtgacacaggcctcattgtgcgagtggaggagaacttcgtc
atcctcttctctgacctcaccatgcatgagctgaaagtgctcccccgggacctgcagctc
tgctcagagacggcatcgggcgtggatgtggggggccagcacgagtggggggagctggtg
cagctggacccccagaccgtgggtgtcatcgtgcgactggagcgggagaccttccaggtg
ctgaacatgtatgggaaggtggtgaccgtcaggcaccaggctgtgacccggaagaaggac
aaccgctttgccgtggccctggactcggaacagaataacatccatgtgaaggacatcgtc
aaagtcattgacggcccccactcaggccgggagggcgaaattcgccatctcttccgcagc
ttcgccttcctgcactgcaagaaactggtggagaacgggggcatgtttgtgtgcaagacc
cgccacctggtcctggcagggggctccaagccccgagatgtgaccaacttcacggtgggt
ggctttgcccctatgagcccccggatcagcagtcccatgcaccccagcgctggaggtcag
cgcggtggctttggcagccccggcggcggcggcggaggcatgagcaggggccgggggcgg
agagacaatgagctcatcggccagactgtgcgcatctcccaagggccctacaaaggctac
atcggtgtggtgaaggatgccaccgagtccacagcccgcgtggagctgcactccacctgc
cagaccatctctgtggaccgtcagcggctcacgacggtgggctcacggcgcccgggaggc
atgacctcaacctacgggcggacgcccatgtacggctcccagacgcccatgtatggctct
ggctcccgcacacccatgtatggctctcagacccctctccaggatggcagccgcacccca
cattacggttcacagacacccctgcatgacggcagccgcactcctgctcagagtggggcc
tgggaccccaacaatcccaacacgccatccagggcggaagaagaatacgagtatgccttc
gacgacgagcccaccccgtccccacaggcctatgggggcacccccaatccccaaacacct
ggctatcccgacccctcatccccacaggtcaaccctcagtataacccacagacgccaggg
acgccagccatgtacaacacagaccagttctccccctatgctgccccctccccgcaaggc
tcctaccagcccagccccagcccgcagagctaccaccaggtggcgccaagcccagcaggc
taccagaacacccactctccagctagctaccaccccacaccctcacccatggcctatcag
gccagccccagcccgagccctgttggctacagtccgatgacgcccggagccccctcccct
ggtggctacaacccgcacacgccaggctcaggcattgagcagaattccagcgactgggta
accactgacatccaggtgaaggtgcgggacacctacctggatacgcaggtggtggggcag
acaggagtcatccgcagcgtcacaggaggcatgtgctccgtgtacctaaaggacagtgag
aaggtggtcagcatctccagtgagcacctggagcccatcacccccaccaagaacaacaag
gtgaaggtgatcctgggtgaggatcgggaagccacgggggtcctattgagcatcgatggg
gaggacggcatcgtccgcatggaccttgatgagcagctcaagatcctcaacctccgcttc
ctggggaagcttctggaggcctga
DBGET
integrated database retrieval system
