Ursus arctos (brown bear): 113243790
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Entry
113243790 CDS
T05909
Symbol
COL11A2
Name
(RefSeq) collagen alpha-2(XI) chain isoform X1
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
uah
Ursus arctos (brown bear)
Pathway
uah04820
Cytoskeleton in muscle cells
uah04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
uah00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
113243790 (COL11A2)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
113243790 (COL11A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
uah00536
]
113243790 (COL11A2)
Glycosaminoglycan binding proteins [BR:
uah00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113243790 (COL11A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_3
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
113243790
NCBI-ProteinID:
XP_026338424
LinkDB
All DBs
Position
Unknown
AA seq
1736 aa
AA seq
DB search
MERCSRCHRLLLLVPLVLGLSAVPATAGAPPVDLLRALRFPSLPDGVRRARGICPADVAY
RVSRPAQLSAPTRQLFPGGFPKDFSLLTAVRTRPGLQAPLLTLYSAQGVQQLGLELGRPF
RFLYEDQTGRPRPPAQPVFRGLSLADGKWHRVAVAVKGQSVTLIVDCKKRVTRPLPRSAR
PLLDTHGVIIFGARILDEEVFEGDIQELVIVPGVQAAYESCEQKELECEGAWRERPQKQQ
SHRAQRSPKQQPSRLHRPQNQEPQRQPAESFYYDYETPYYDAMTAGTTPDYQDPTPGEEE
GILESSPLPAPEEEQTDLQVPSTADRFLTEEYGEGGTDPPAGPYDYTYGYGDDYREETEL
GPALSAETAPSGSAARGPRGLKGEKGEPAVLEPGMLVEGPPGPEGPAGLIGPPGIQGNPG
PVGDPGERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGSGGGDKGPVVAAQEAQAQAILQQ
ARLALRGPPGPMGYTGRPGPLGQPGSPGLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRA
GADGARGMPGEPGVKGDRGFDGLPGLPGEKGHRGDTGSQGLPGPPGEDGERGDDGEIGPR
GLPGESGPRGLLGPKGPPGIPGPPGVRGMDGPHGPKGSLGPQGEPGPPGQQGTPGTQGLP
GPQGAIGPHGEKGPQGKPGLPGMPGSDGPPGHPGKEGPPGTKGNQGPSGPQGPLGYPGPR
GVKGVDGIRGLKGHKGEKGEDGFPGFKGDMGVKGDRGEVGVPGSRGEDGPEGPKGRTGPT
GDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGPRGER
GPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGERGLPGPQGPNGFPGPKGPPGPPGKD
GLPGHPGQRGEVGFQGKTGPPGPPGVVGPQGAAGETGPMGERGHPGPPGPPGEQGLTGTA
GKEGTKGDPGPPGAPGKDGPAGLRGFPGERGLPGTAGGSGLKGNEGPAGPPGPAGSPGER
GAAGSGGPIGPPGRPGPQGPPGAAGEKGVPGEKGPIGPTGRDGVQGPVGLPGPAGPPGVA
GEDGDKGEVGDPGQKGTKGNKGEHGPPGPPGPLGPVGQPGAAGADGEPGARGPQGHFGAK
GDEGTRGFNGPPGPIGLQGLPGPLGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPP
GGVGNLGPPGEKGEPGESGSPGVQGEPGVKGPRGERGEKGESGQPGEAGPPGPKGPTGDD
GPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDQGEDGEPGQPGSPGPTGENGPPGPLGKR
GPAGTPGPEGRQGEKGAKGDPGAVGAPGKTGPVGPAGPAGKPGPDGLRGLPGSVGQQGRP
GATGQAGPPGPVGPPGLPGLRGDVGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSA
GQKGETGIPGASGPIGPGGPPGLPGPAGPKGAKGATGPAGPKGEKGVQGPPGHPGPPGEV
IQPLPIQMPKKTRRSVDGSRLMQEEEAIPTGGAPGSAGGLEEIFGSLDSLREEIEQMRRP
TGTQDSPARTCQDLKLCHPELPDGEYWVDPNQGCARDAFRVFCNFTAGGETCVTPRDDVT
QFSYVDSEGSPVGVVQLTFLRLLSVSAHQDVSYPCSGVAQDGPLKLRGANEDELSLETSP
YVKEFRDGCQTQQGRTVLEVRTPVLEQLPVLDASFSDLGAPPRRGGVLLGPVCFMG
NT seq
5211 nt
NT seq
+upstream
nt +downstream
nt
atggagcggtgcagccgctgccatcgcctcctcctgctggtaccgctggtgctggggctg
agcgcggtccccgccacggcaggtgcaccccctgtggacctgctccgggccctgaggttc
ccctcccttcctgatggcgtccggagggcgagaggcatctgtccggctgatgtggcctac
cgagtgtcccgacccgcccagctcagtgcacccacccgccagctcttcccaggaggtttt
cccaaagatttctcattgctgactgctgtccggacccgccctggcctccaggctcccctc
ctgactctctacagtgcccagggtgtccaacagctgggcctggagcttggccgaccgttc
cgcttcttgtatgaggaccagactggacggcctcgacccccggctcagccagtcttccga
ggcctcagcctagcagatggcaagtggcaccgtgtggctgtggctgtgaagggccagtct
gtcaccctcatagttgactgcaagaagcgggtcacccggcctctcccccgaagtgctcgt
ccactgttggacacccatggcgtgattatctttggtgcccgtatcctggatgaagaagtg
tttgagggtgacatccaggagcttgtcattgtcccaggggtgcaagctgcctacgaatcc
tgtgaacagaaggagctggagtgtgagggagcttggagggagagacctcaaaaacaacag
tctcacagagcccagagatctccaaagcagcagccatcaagacttcataggccacaaaac
caggaacctcagcgacagcccgctgagtctttctactatgactacgagaccccctattac
gatgcgatgactgcagggacgacccctgattatcaggaccccaccccaggtgaagaggaa
ggaatcctggaatcaagccccttgccagcccctgaggaggagcagacagatctccaggtc
ccctccacagccgacaggttcctgacagaggaatatggggagggtggcacagacccccca
gcagggccctacgattacacctatggctatggggacgattatcgtgaggagacggagctt
ggccctgccctgtctgcggagacagccccctcgggatccgctgcccgtggaccccgggga
ctgaagggagagaagggggagcctgcggtgctggaacctggtatgctagtggaggggcct
cctggcccagaaggccctgcggggctgattggtccccctggcatccagggcaacccaggt
ccagttggagaccctggcgagaggggcccccctggccgagcagggctccctggatcggat
ggggcccctggccctcctggcacatctctcatgctcccattccgctttggcagtggtggg
ggtgacaagggccctgtggtggcagcccaggaggctcaggcccaggcgattctgcagcag
gcacggctggcgctccggggaccccctggccccatgggatacacaggccgccctggaccc
ttgggacaacctgggagccctggcctgaaaggagaatcaggagacctaggacctcagggc
cccagaggacctcaaggcctcacaggccctcctggcaaggctgggagaaggggccgagcg
ggtgctgatggagcgcgagggatgcctggagaacctggagtgaagggtgaccgaggtttt
gatggactcccagggctacctggggagaaggggcaccggggtgatactggttcccagggc
cttcctggtccccctggtgaggatggagagcggggagatgacggggagattgggcctcgg
ggactgcctggagagtcgggacctcgaggtctccttggccccaaaggcccacctggtatt
cctggacccccgggagtccgaggcatggatggtccccatggtcccaaagggagcttggga
ccccagggagagccaggacctcctggacaacagggcactcctggaacccagggtctccct
gggccccagggtgccattgggcctcatggagagaagggccctcaagggaaaccggggctc
cctggcatgcctggctcagatggacctccgggtcaccctggaaaggaaggtccccctgga
accaaaggaaaccagggtccatctggacctcagggtcctctaggatacccaggacctcga
ggtgtcaagggtgtggatggaattcgtggtctgaagggtcataagggtgaaaagggcgag
gatggttttcccgggttcaaaggggacatgggcgtgaaaggtgacaggggagaggttgga
gttcctggctccaggggagaagatggtcccgaggggccgaagggacgcactggacccact
ggagaccctggcccccctgggctcatgggtgaaaagggcaagctgggtgttcctggtctg
cctggctaccctggacgccagggtcccaaggggtccctgggatttcccggttttcctggt
gccagtggagagaagggagcccggggcctgtcggggaaatcagggcctaggggagagcgg
ggccccacgggtccacggggtcagcggggaccccgaggtgccactgggaagtctggtgct
aagggaacatcaggtggtgatggtccccatgggccccccggagaaaggggtctccctgga
cctcaaggccccaatggatttcctggccccaaaggacctccgggtccccctgggaaggat
gggctaccaggacacccaggccagagaggagaagtgggtttccaagggaagactggcccc
cctggccctccaggggtggtgggacctcagggagcagcaggagaaaccgggcccatgggg
gagagaggtcaccctggccccccaggccccccgggagagcagggactgactggaacagct
gggaaggaaggaacgaagggtgaccctggtcccccaggggctccagggaaggatggacct
gctggtctgaggggcttcccaggagagagaggcctccctggcactgccggtggatccggt
ttgaagggaaacgaaggtccggccggtccccctggccctgcaggctcccctggagagcga
ggtgcagcaggatcggggggacccattggccccccagggcgcccaggcccacagggtccc
cctggagccgcaggagagaaaggtgtcccgggtgagaagggccccattggtccaactggc
cgagatggggtgcagggtcctgtggggcttcctggtcctgctggacccccaggcgtggca
ggagaggatggagacaagggtgaggtgggagaccctggacagaagggcactaaagggaat
aagggtgaacatggtcctcctggacctcctggaccccttggtcctgtggggcagcccgga
gcagcgggagcagatggggaacctggagctcggggaccccagggacactttggagccaaa
ggtgatgaaggaacgagaggattcaatgggcccccaggacccattggcctacagggtctg
ccaggccccttgggtgagaagggagaaacaggagatgtgggccctatgggaccacccggc
cccccaggacctcgaggcccagctggacccaatggagctgatggtccgcaaggtcccccg
ggaggtgttgggaacctgggtccccctggagagaagggtgagccaggagagtcaggatct
ccaggggtccagggagagccaggtgtcaagggcccacgtggggagcgtggggagaaagga
gagtcggggcaaccaggagaggcaggaccaccagggcctaaaggccccaccggtgatgat
ggtcccaaagggaaccctggtcctgttggttttcctggtgatcctggccctcctggagaa
ggtggccctcggggccaagatggtgcgaagggtgaccaaggagaggacggcgagccagga
cagcctggatcccctggtcccactggggagaatggaccccctggaccacttggaaagcgg
ggtccggccggcacgcctggtcctgaggggcggcaaggggagaagggagccaagggggat
cctggtgctgtgggtgccccagggaagacaggccctgtgggtccagcaggcccagcaggg
aaacctggtcctgatggtctaaggggactcccgggctcagtgggtcagcaaggccgtcct
ggggccacaggccaggcggggcctccaggtcctgtgggacccccggggcttcctggcctc
cgaggtgatgttggagccaagggcgagaagggtcacccaggtctcatcggactgattggg
ccccctggggaacagggagagaagggtgatcggggacttcctggccctcagggctctgct
ggacagaagggagagacgggtatcccaggagcgtctggccctatcggtcctggagggcct
cctggcctccctggacctgctggccccaaaggagccaaaggagccacaggcccagctgga
cccaagggagagaagggcgtccagggtcctccaggacacccgggccctccgggtgaggtg
atccagcccctgcccatccagatgcccaagaagactcggcgctcggtggatggaagccgc
ctgatgcaggaggaggaggccataccgactgggggcgctccgggcagtgctggggggctg
gaggagatcttcggctccctggactccctgcgggaagagattgagcagatgaggcggccg
acggggacccaggacagccccgctcgcacctgccaggacctgaaactctgccacccggag
ctgcctgatggagaatactgggtcgatcccaaccagggctgtgctcgggacgccttccgg
gttttctgcaactttacagccggaggggaaacgtgtgtaacgcccagggatgatgtcacg
caattctcttacgtggactccgaaggctccccggtgggtgtggtccagctcaccttcctg
cggctgctcagcgtctcagcccaccaggacgtctcctacccctgctctggggtggcccag
gatggtcccctgaagctccggggggccaatgaggatgagctgagcctggagaccagcccc
tacgtcaaggaattcagagatggctgtcagacacagcaaggccggacggtgctggaggtg
cggacacctgtgctggagcagctaccagtgctggacgcctccttctcagacctgggggcc
ccccctcggcggggaggggtgctgctggggcctgtctgcttcatgggctag
DBGET
integrated database retrieval system
