Ursus arctos (brown bear): 113243992
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Entry
113243992 CDS
T05909
Symbol
IGHMBP2
Name
(RefSeq) DNA-binding protein SMUBP-2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
uah
Ursus arctos (brown bear)
Brite
KEGG Orthology (KO) [BR:
uah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
uah03009
]
113243992 (IGHMBP2)
03012 Translation factors [BR:
uah03012
]
113243992 (IGHMBP2)
Enzymes [BR:
uah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
113243992 (IGHMBP2)
5.6.2.5 RNA 5'-3' helicase
113243992 (IGHMBP2)
Ribosome biogenesis [BR:
uah03009
]
Eukaryotic type
Other ribosome biogenesis factors
113243992 (IGHMBP2)
Translation factors [BR:
uah03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
113243992 (IGHMBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_30
AAA_19
zf-AN1
Viral_helicase1
DEAD
ResIII
nSTAND3
AAA_22
IstB_IS21
SLFN-g3_helicase
AAA_16
UvrD-helicase
Helicase_RecD
AAA_25
Flavi_DEAD
AAA
DnaB_C
PhoH
Zot
ABC_tran
NPHP3_N
UvrD_C_2
NTPase_1
Motif
Other DBs
NCBI-GeneID:
113243992
NCBI-ProteinID:
XP_026338777
LinkDB
All DBs
Position
Unknown
AA seq
998 aa
AA seq
DB search
MATAAVESFVTKQLDLLELERDAEVEERRSWQESISPKELQSRGVCLLKLQVSSQRTGLY
GRLLVTFEPRRCASAPVLPSNSFTSGDIVGLYDEGSQLATGILTRITQRSVTVAFDESHD
FQLSLDREQSYRLLKLANDVTYKRLKKALITLKKYHSGPASSLIEVLFGGSAPSPASEIQ
PPLFCNASLDASQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAVRQGLKVLCCAP
SNIAVDNLVERLARCKQRVLRLGHPARLLESIQQHSLDAVLARSDNAQIVADIRKDIDQA
FAKNRQTQDKREKSSVWSEIKLLRKELKEREEAAMLESLTSAAVVLATNTGASSDGPLKL
LPDSHFDVAVIDECAQALEASCWIPLLKSRKCILAGDHKQLPPTTVSHKAALAGLSLSLM
ERLAEEHGARVVRTLTVQYRMHRAIMQWASDALYHGQLTAHPSVAGHLLRDLPGVAATEE
TGIPLLLVDTAGCGLFELEEEDDQSKGNPGEVRLVSLHIQALVDAGVQASDIAVITPYNL
QVDLLRQSLAHRHPELEIKSVDGFQGREKEAVVLSFVRSNRKGEVGFLAEDRRINVAVTR
ARRHVAVVCDSRTVNNHAFLKTLVDHFTEHGEVRTAFEYLDDIIPENYSHESSQGHGQTG
AKPHGSAALARKPPGGRPQEGAQGARAAAGLEQKRPGGKPSGPEVPSQPTLNGGSPEGAG
SRDRAERFRAKIAEFVASEKTQLEFPASLNSHDRMWIHQIAEEHGLRHDSTGEGKKRFIT
VSKRAPPAPPAPPPPAGAGSQTPVGPRAPGPTQTDPPLGEPSSQDPLNLKALHLERLQRE
KSRQERPAKEGPAKEGQQASRSGLRTLPEKKKKKEAKGHAAVDLPGEEDFDALVAAAIKA
DNSCGLAKCTASVVTLGQLCLHCGRRFCLSHHLPEIHGCGERARAHARQRISREGVLYAG
SGTKDRSLDPAKRAQLQRRLDKKLDELTSQRKSKRKEK
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atggccacggcggccgtggagagcttcgtgaccaagcagttggacctgctggagctcgag
agagacgcggaggtcgaggagcgcaggtcttggcaggaaagcatctctccgaaagaactg
cagagccgaggcgtgtgtttgctgaagctgcaggtgtccagccagcggactgggctgtat
gggcggctgctggtcacctttgagcccaggagatgtgcgtctgccccggtgcttcccagc
aacagcttcacttcaggcgatatagtgggtctgtatgacgaagggagtcagctggccacg
gggatcctgacccggatcacgcagagatcggtcacggtggcctttgatgagtcccatgac
ttccagctgagcttggaccgggagcagtcctacagactgttaaagctggccaatgatgtc
acttacaagcgactgaaaaaggctctgatcaccctaaagaagtaccattctggccctgcg
tcctcgctcatagaggtcctctttggtggatcagcccccagtcctgccagtgagatacag
ccaccgctgttctgtaacgcttccctggatgcctcccagaaggaagcggtctccttcgcg
ctgtcccagaaagagctggccatcatccatgggcctcctggcaccgggaagaccaccacc
gtggtcgagatcattcttcaggctgtgaggcagggcttaaaggttctgtgctgtgctccc
tctaacattgccgtggacaacctggtagagcgtctggctcggtgtaagcagagggtcctg
cgcctcgggcaccctgcccgcctgctggagtccattcagcagcattccctggacgcggtg
ttagcgcggagtgacaacgcccagatcgtcgcagacatcagaaaggacatcgatcaggcc
ttcgcgaagaacaggcagacccaggataagagagagaagagtagcgtttggagtgaaatc
aagctgttgaggaaggagctgaaggagagggaggaggccgcgatgctggagagcctcacg
tcggctgcggtggtgctggcaacaaacacaggtgcttcttctgacggccctctgaagctg
ctgcccgacagccacttcgacgtggcggtcatcgacgagtgcgcccaggccctggaagcc
agctgctggatccccctgctgaagtccaggaagtgcatcctggctggagatcacaagcag
ctgccccccaccacggtctctcacaaggctgccctggcggggctgtcgctgagcctgatg
gagcgcctggcggaggagcacggcgcgcgggtggtgcggacgctgacggtgcagtaccgc
atgcaccgggccatcatgcagtgggcctcggacgccctgtaccacgggcagctcacagcc
cacccttccgtggctgggcacctcctgcgggacctcccaggagtggctgcgacggaggag
acgggcatccccctgctgctcgtggacacggctggctgcgggctgtttgaacttgaagag
gaggacgaccagtctaaggggaaccctggtgaagtgcgcctcgtcagtctgcacatccag
gccctggtggatgctggtgtccaagcgagtgacatcgccgtcatcacaccgtacaacctc
caggtggacctgctcaggcagagccttgcccacaggcaccccgagcttgaaattaagtca
gtcgatggcttccaaggccgagagaaggaggctgtggtcctgtccttcgtcagatccaat
aggaaaggtgaagtgggcttccttgccgaggaccggcggatcaacgttgctgtcacccgc
gctcggcgccatgtggcagttgtgtgtgattctcgcactgttaacaaccatgcctttttg
aagaccctggtagatcacttcacagagcacggggaagtacgcacagcctttgagtatctt
gatgacatcatccctgaaaactactcccatgagagttcccagggccacggccaaactggt
gcaaagccccacggctctgcggcgctggccaggaagcctcccggaggccggccgcaggag
ggggcccagggggccagagcagctgccgggctggagcagaagaggccgggtgggaagccc
tcgggccctgaggtcccttctcagcccaccctcaacggaggcagcccagagggagcaggg
agcagagaccgtgcagagcgcttcagggccaagattgctgagtttgtggcgagtgagaaa
actcagttggagtttcctgcttccctgaactcccacgacaggatgtggatccaccagata
gccgaagagcatgggctgaggcacgacagcaccggggaagggaagaagaggttcatcacc
gtgagcaagagagccccacccgccccaccggccccaccgccaccagcaggggccggcagc
caaacccctgtcggtcccagggcccctggccccacacagaccgatcctcctcttggggag
ccaagcagccaggaccccctgaatctgaaggccctgcacctggaaaggctgcagagagag
aagagcaggcaggagcggccagccaaggaggggccagccaaggaggggcagcaggcctcg
cgctccgggctgcgcacgttaccagagaagaagaaaaagaaggaagcgaaaggacacgcg
gccgtagatttgcccggcgaggaggacttcgatgccctggtcgcggccgccatcaaggct
gataacagctgtggcctcgcgaagtgcacggccagcgtcgtgactctgggccagctctgt
ctgcactgcggccgccgcttctgcctcagccaccacctgcccgagatccatggctgtggg
gagagggctcgtgcccacgcccggcagaggatcagccgggaaggagtcctctatgccggc
agtgggaccaaggacaggtccctggacccggccaagagggcccagctccagaggaggctg
gataagaagctggatgagctgacgagccagaggaagagtaaacggaaggagaagtga
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