Ursus arctos (brown bear): 113244575
Help
Entry
113244575 CDS
T05909
Symbol
TNRC6C
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein isoform X5
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
uah
Ursus arctos (brown bear)
Brite
KEGG Orthology (KO) [BR:
uah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uah03019
]
113244575 (TNRC6C)
03036 Chromosome and associated proteins [BR:
uah03036
]
113244575 (TNRC6C)
Messenger RNA biogenesis [BR:
uah03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113244575 (TNRC6C)
Chromosome and associated proteins [BR:
uah03036
]
Eukaryotic type
Gene silencing
piRNA pathway
113244575 (TNRC6C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
Ago_hook
UBA_7
UBA
RRM_1
RRM_occluded
UBA_NBR1_C
THOC7
Motif
Other DBs
NCBI-GeneID:
113244575
NCBI-ProteinID:
XP_026339815
LinkDB
All DBs
Position
Unknown
AA seq
1806 aa
AA seq
DB search
MVELRAPAGSPDLSHGGLADHYESSHWGQQRTYRGEASSSWDKVIIDRTDKEAWPSITGA
ETESASECTTDTDSASNCGSENSSMATGSAQGTFTGHTKKTNGNNGTNGALVQSPSNQSA
LGAGGANGNGNGARVWGVATGSSSGPAHCSLSGGDGKMDNMIGDGRSQNCWGASNSNAGI
NLNLNPNANPAAWPVLGHEGTVATGNPSSICSPVSAIGQNTGNQNGNPTGTLGAWGNLLP
QESTEPQTSTSQNVSFSVQPQNLNTDGPNNTNPMNSSPNPVNAMQTNGLPNWGMAVGMGA
IIPPHLQGLPGANGSSVSQVSGSGGEGISSSVWGLSPGNPATGSSNSGFNQGNGDTVNSA
LSAKQNGSSSAVQKEGSGGNAWDSGPPAGPGLLAWGRGSGNNSSVSHIHSGAWGHPSRST
SNGVNGEWGKPPNQHSNNDINGKGSTGWDSASVSSQNPAIQPGSEHMNSWAKAASSGTTA
SEGSSDGSGSHNEGSSGREGAEGRRRDKGMIDQGHIQLPRNDLDPRVLSNTGWGQTPVKQ
NTAWEFEESPRSERKNDNGTEAWGCAATQPSNSGGKSDGSIANSTNTSSVPGWASAPPAA
GPANTGWGDSSNKAPNGPGVWGDSISSTAVNNAAAAAKSGHAWSGTVNQEDKSPTWGEPQ
KPKSQNWGDGQKSNPAWSAGGGDWADSSSVLGHLGDGKKNGSGWDADSNRSGSGWNDTTR
SGTSGWGNGTNAKVNPGTNWGESLKPGPQQNWAGKPQDNNVSNWGGAASVKQTGTGWIGG
PVPVKQKDSSEATGWEEPSPPSIRRKMEIDDGTSAWGDPSNYNNKTVNMWDRNNPGVQSS
TTAAATTTTTTTSSSTDVVETPPPHQASAQLSRSPLLGPVSAGWGEMPNVHSKAESSWGE
PSSPSALVDNGTAAWGKPPSSGSGWGDQPTEPPVTFGRANAPAAAPALCKPASKSMQEGW
GSGGDDMNLGTSQWEDEEGGMWNNAASQESTSSCSSWGNAPKKGLPKGMKTSGKQDEAWI
MSRLMKQLTDMGFPREPAEEALKSNNMNLDQAMSALLEKKVDVDKRGLGVTDYNGVVTKA
LGCRPPVSKDSSGDRPTFLDKDGGLVEEPTTSPFLPSPSLKLPLSNSALPNQALGGIASG
LGMQNLNSSRQMPSGNLGMFGSGAAQARTMQQPPQPPVQPLSSSQPSLRAQVPPFLSPQV
QAQLLQFAAKNIGLNPALLTSPINPQHMTMLNQLYQLQLAYQRLQIQQQMLQAQRNVSGP
MRQQEQQVARTITNLQQQIQQHQRQLAQALLVKPPPPPPHLSLHPSAGKSAMDSFPPHPQ
APGLPDLQTKEPQSSPSTFAPYPLAGLNPNMNVNSMDITGGLSVKDPSQSQSRLPQWTHP
NPMDNLPGAASPLDQNPSKHGAIPGGLSIGPPAKSSIDDSYGRYDLIQNSESPASPPVAV
PHSWSRAKSDSDKISNGSSINWPPEFHPGVPWKGLQNIDPENDPDVTPGSVPTGPTINTT
IQDVNRYLLKSGGSSPPSSQSAALPSSSAWPLSASGYGRSFSSIAPAPSIAGKLSDIKST
WSSGPASHTQASLSHELWKVPRNTTAPTRPPPGLTNPKPSSTWGASPLGWTSSYSSGSAW
STDTSGRTSSWLVLRNLTPQIDGSTLRTLCLQHGPLVTFHLNLTQGNAVVRYSSKEEAAK
AQKSLHMCVLGNTTILAEFAGEEEVNRFLAQGQALPPTSSWQSSTGTGQTRLGAAGSSHG
LVRSDTGHWSAPCLAGKGSSDLLWGGVPQYSSSLWGPPSSDDGRVIGSPTPLNTLLPGDL
LSGESI
NT seq
5421 nt
NT seq
+upstream
nt +downstream
nt
atggtggagctgcgcgccccggccggctcgccagatctcagtcacggtggattggcagat
cactatgaaagttcccactggggacagcagcgcacgtacagaggtgaagccagcagcagc
tgggataaagtgataatagacaggactgacaaggaggcgtggccttccatcaccggagca
gagactgaatctgcctcagaatgtactacagacactgactctgcctccaactgtggctca
gagaacagtagcatggctacagggagtgcccagggcaccttcactggacataccaagaag
acgaatggcaataatggcaccaacggtgcactcgtccaaagcccttctaatcagagtgcc
cttggagcagggggcgccaacggtaatggaaatggagccagagtgtggggcgtagccaca
ggctccagctccggcccagctcactgctctctcagtggtggggatggaaaaatggacaac
atgattggagatgggagaagtcagaattgctggggtgcttccaactccaatgccggcatt
aatcttaaccttaaccctaatgccaacccagctgcctggcctgtacttggacatgaagga
actgtggcgacaggcaacccttccagtatttgcagtccggtcagtgccataggtcaaaat
acgggcaaccagaacgggaacccaacaggcactttaggtgcttggggaaacttgctgccg
caagagagcacagaaccacaaacgtccacttctcagaatgtgtctttcagcgtacaacct
cagaaccttaacactgatggaccaaataacactaaccccatgaactcttcaccaaaccct
gtcaatgcaatgcagacaaacggactgccaaactggggcatggctgttggtatgggggcc
atcatcccgccccacctgcaaggccttcctggtgctaacggatcatccgtttctcaagtc
agtgggagcggtggcgaaggaatcagcagttctgtgtggggactgtccccaggtaaccct
gccacaggaagtagcaattctgggttcaatcaggggaatggagacactgtgaactcagca
ttgagtgctaaacaaaatggatccagcagtgctgtgcagaaggaaggaagtggaggaaac
gcctgggactccggtcctcctgctggtcctggactcctcgcctggggacggggcagtggc
aacaacagcagcgttagtcatatccattcaggggcttggggccaccccagccggagcacc
tctaacggtgtgaatggggagtggggcaagcccccaaaccagcattccaacaatgacatc
aatgggaaaggatcaacagggtgggacagtgcgagtgttagcagccagaatcctgccata
cagcctggcagtgaacacatgaactcttgggccaaagctgcatcttccggaacgacagca
agcgaaggaagtagcgatggctctggcagtcacaatgaaggaagctctgggagggaaggg
gcagaaggccgaaggcgagataaagggatgatagaccaagggcacatccaattgccaagg
aacgatcttgacccaagagttctgtctaatactggttggggacagactccagtaaagcaa
aacactgcctgggaatttgaagagtcccctaggtctgagagaaaaaatgacaatgggaca
gaggcctggggctgtgccgctactcagccttcaaactcaggggggaagagtgatgggtcc
atcgcgaacagtacaaatacctcttcagtgcccgggtgggccagcgcaccgccggctgct
gggccagcaaacacaggctggggagacagcagcaacaaagcgccaaacggcccaggggtt
tggggggactcgataagctctactgctgttaataatgctgctgctgccgccaagagtggc
catgcttggagtgggaccgtaaatcaggaggacaagtcgcccacctggggggagcctcag
aaacccaaatctcaaaactggggagacggacaaaaatctaatccagcctggagtgcagga
gggggagattgggcagattcgtcttctgtcctcggacacttgggggatgggaaaaaaaat
ggctccggatgggatgctgacagtaatcggtcagggtctggttggaatgatactaccagg
tctgggaccagtggctggggtaatggcacaaatgcaaaggtgaatccagggacaaactgg
ggagagtctttgaaacctggcccccaacagaactgggcgggcaaaccccaagacaacaat
gtgagtaactggggaggagccgcttccgttaaacagacaggaactgggtggatcggggga
ccagtccctgtcaaacaaaaggacagcagtgaggccacgggctgggaggaaccttctcca
ccatccattcgacgcaaaatggaaattgatgatggtacctcagcttggggtgacccaagc
aactacaacaataaaactgtaaacatgtgggatagaaacaacccaggcgtgcagagcagt
accacggccgccgccaccaccaccaccaccaccacgagcagcagcacggacgtggtcgag
acgccaccgccgcaccaggccagcgcccagctgagtcggtcgccgctgctcggtccagtc
tcagcgggctggggagagatgcctaacgtccactcaaaggccgaaagctcctggggagag
ccgtcctccccctccgccctggttgacaacggcactgcagcgtggggcaagccgcccagc
agtggcagcggatggggggaccagcccacagagccgccggtgacattcgggagagccaac
gcccccgccgccgccccagccctgtgcaaaccagcttcaaaatctatgcaagaaggctgg
ggcagtggtggggacgacatgaacctcggtaccagtcagtgggaagacgaagaagggggc
atgtggaacaatgctgcttcccaagaaagcacctcctcctgcagttcctgggggaacgcc
cccaaaaaaggactcccaaagggcatgaaaacgtctggcaagcaggacgaggcctggatc
atgagccggctgatgaaacaactcacagacatgggcttcccgagagagccagctgaagag
gccttgaagagtaacaatatgaatcttgaccaggccatgagcgccctgctggaaaagaag
gtggacgtggacaagcgtggactgggagtgaccgactacaatggagtggtcaccaaagcc
cttggctgccgcccaccagtctccaaagactcttccggggaccgccccacctttctcgac
aaggacggcggcctagtggaagagcccacgacttcaccgtttttgccttcaccaagcctg
aagctccccctttcaaacagtgcactccctaatcaggccctgggtgggattgcctcaggg
ctgggcatgcaaaacttgaattcttctagacagatgccgagtggcaatctgggcatgttc
ggcagcggagcagcacaagccaggaccatgcaacagccgccgcagccccccgtgcagcct
ctgagctcctcccagcccagcctccgtgctcaagtgcctccgtttctatcccctcaggtt
caagcacagcttttgcagtttgcagcaaaaaacattggtctcaaccctgcactattgacc
tcgccaatcaatcctcagcatatgacgatgttgaaccagctctatcagctgcagctggca
taccaacgtttacaaatccagcagcagatgctacaggctcagcgtaatgtttccggaccc
atgagacaacaggagcagcaagttgcgcgcacaatcactaacctgcagcagcagatccag
cagcaccagcgccagctggcccaggccctgctcgtgaagccgccgccgcccccgccgcac
ctgtctctgcacccctctgcaggcaaatcggccatggacagcttccccccccacccccag
gcccccggcctgcctgacctgcagaccaaagagccgcagtcttcacccagcacctttgct
ccttaccctctcgctggactgaacccaaacatgaatgtcaacagcatggacataactggt
ggtttgtcggtgaaggacccgtctcagtcccagtcacgcctccctcagtggacacacccc
aacccgatggacaacttacccggtgctgcttctcccctcgatcagaaccccagcaagcat
ggtgctatccctggaggtctaagcattgggcctccagctaagtcctccatcgacgactcc
tatggccggtacgatttaatccagaacagtgagtcaccagccagtcctcctgtagctgtt
ccccatagctggtcacgtgccaaatctgacagtgataaaatctccaatggctccagcatc
aactggcccccagaattccatcctggagttccatggaaaggacttcagaatatagacccc
gagaacgaccccgacgtcactcccggaagtgtccccaccgggcctaccatcaacaccacc
atacaggacgtcaaccgctacctcctcaagagtggagggtcctccccaccatcatctcag
agtgccgcgctgccttcctcgagtgcctggccgctcagtgcctccggctacggtcgctct
ttcagcagcatcgcgcccgcgcccagcatcgcaggtaaactgtcagacattaaatcgacg
tggtcctctggccctgcctcccacacgcaagcctctctgtctcatgaactgtggaaggtg
cccagaaacactactgcacccacaaggccacctccagggttaaccaatcccaagccttcc
tcgacctggggagccagtcccctcggctggaccagctcttactcctcgggttccgcctgg
agcacggacacctcaggacggacaagcagctggctcgtcctccgcaacctcacgccccag
atcgacggctctaccctgcggacgctgtgtttgcagcacgggcccctcgtcacattccac
ctgaacctgactcaaggcaacgccgtggtccgctacagctccaaggaggaagccgccaag
gcccagaagtccctgcacatgtgtgttctgggaaacactaccatcttggccgagtttgcc
ggcgaagaagaggtgaaccgtttcttagcccaaggccaagcactgccgcccacctccagc
tggcagtccagcaccggcaccggccagacgcgcctgggcgcagcgggcagctcccacggc
ctggtgcggagtgacactggccactggagcgccccgtgtctggcaggcaaagggagcagt
gacctgctgtggggcggggtcccccagtactcgagcagcctgtggggcccgcccagcagt
gacgacggcagggtgatcggaagccccaccccgctgaacactctgcttcctggcgacctt
ctcagcggggaatccatctag
DBGET
integrated database retrieval system
