KEGG   Ursus arctos (brown bear): 113246913
Entry
113246913         CDS       T05909                                 
Symbol
DDB1
Name
(RefSeq) DNA damage-binding protein 1 isoform X2
  KO
K10610  DNA damage-binding protein 1
Organism
uah  Ursus arctos (brown bear)
Pathway
uah03420  Nucleotide excision repair
uah04120  Ubiquitin mediated proteolysis
uah05161  Hepatitis B
uah05170  Human immunodeficiency virus 1 infection
uah05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:uah00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    113246913 (DDB1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    113246913 (DDB1)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    113246913 (DDB1)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    113246913 (DDB1)
   05161 Hepatitis B
    113246913 (DDB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:uah04121]
    113246913 (DDB1)
   03400 DNA repair and recombination proteins [BR:uah03400]
    113246913 (DDB1)
Ubiquitin system [BR:uah04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     113246913 (DDB1)
DNA repair and recombination proteins [BR:uah03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      113246913 (DDB1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      113246913 (DDB1)
SSDB
Motif
Pfam: CPSF_A Beta-prop_RSE1_1st Beta-prop_RSE1_2nd Beta-prop_RIG_2nd Beta-prop_IFT122_1st
Other DBs
NCBI-GeneID: 113246913
NCBI-ProteinID: XP_026343428
LinkDB
Position
Unknown
AA seq 1193 aa
MPRAPAALACNVSVGRRQRQWSSPRAGGGPCLFACVHFSIVALECRRAVPDLDMSYNYVV
TAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELF
RPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPE
CRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQG
RHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLA
IAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE
TSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDL
ERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVL
SFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALV
SEWKEPQGKNISVASCNSSQVVVAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLG
DSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALG
DGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLV
FSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQ
EVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVE
VHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGR
IVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYN
NIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLG
AENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGS
VLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATG
FIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH
NT seq 3582 nt   +upstreamnt  +downstreamnt
atgccccgcgccccggccgctctggcctgcaacgtgtctgtggggcggaggcagcggcag
tggagttcgccgcgcgcgggtgggggcccctgtctcttcgcctgtgtccatttctctatc
gttgccctcgagtgccgacgggccgtcccagacctcgacatgtcgtacaactacgtggta
acggcacagaagcccaccgccgtgaacggctgcgtgaccggacactttacttcagctgaa
gacttgaacctgttgattgccaaaaacacgagattagagatctatgtggtcactgctgag
gggcttcggcccgtcaaagaggtgggcatgtatgggaagattgcggtcatggagcttttc
aggcccaagggggagagcaaggacctgctgtttatcctgacagctaaatacaatgcctgc
atcctggaatataagcagagtggcgagagcattgatatcataacgcgagcccatggcaat
gtccaggaccggattggccgcccctcagagactggcattattggcatcatcgaccctgag
tgcaggatgattggcctgcgactctatgatggccttttcaaggttattccgctagaccgg
gacaataaagagctcaaggcctttaacatccgcctcgaggagctgcatgtcatcgatgtc
aagttcctatatggttgccaagcacctaccatctgctttgtctaccaggaccctcagggg
cggcacgtgaaaacctatgaggtgtctctccgagagaaggagttcaataagggcccttgg
aaacaggagaatgtagaagctgaagcttccatggtgattgcagtcccagagcccttcgga
ggggccatcatcattggacaggaatcaatcacctatcacaacggtgacaaatacctggca
attgcccctcctattatcaagcaaagcacgattgtctgtcacaatcgtgtggaccccaat
ggttcccgctatctgctgggagacatggaaggacggctcttcatgctgcttttggagaag
gaggaacagatggacggcactgtcaccctcaaagatctccgtgtggagctccttggagag
acctctattgctgaatgcttgacatacctcgataacggtgttgtgttcgttgggtctcgc
cttggggactctcagcttgtgaagctcaatgttgacagcaatgaacaaggctcctatgta
gtggccatggaaacctttaccaatttaggacccattgtggacatgtgcgtggtggacctg
gagaggcaggggcagggacagctggttacttgctctggggcttttaaggaaggttccttg
cggatcatccggaacggaattggaatccatgagcatgccagcattgacttaccaggcatt
aaaggtctgtggccgctgcggtctgaccctaaccgggagactgatgacacgctcgtgctc
tcttttgtgggccagacaagagttctcatgttaaacggagaagaggtggaagaaaccgaa
ctgatgggtttcgtggatgatcagcagaccttcttctgtggcaacgtggctcatcagcaa
ctcatccagatcacttcagcatctgtgaggttggtctctcaggaacccaaagccctggtc
agcgagtggaaggagcctcagggcaagaacatcagcgtggcctcctgcaacagcagccag
gtggtggtggcggtggggagggccctctactacctgcagatccaccctcaggagctccgg
cagatcagccacacagagatggaacacgaagtggcctgcttggacatcaccccactgggg
gacagcaacgggctgtcccctctttgtgccattggcctctggacagacatctcagcgcgt
atcctgaagctgccctcttttgagctactgcacaaagagatgctgggtggagagatcatt
cctcgttccatcctgatgaccacatttgagagtagccactacctcctttgtgccttggga
gatggggcgcttttctacttcgggctcaacattgagacaggcctgttgagcgaccgtaaa
aaggtgactctgggcacccagcccacggtattgaggactttccgttctctttctaccacc
aacgtctttgcttgctccgaccgccccaccgtcatctacagcagcaaccacaaattggtc
ttctccaatgtcaacctcaaggaagtcaactacatgtgtcccctcaactctgatggctat
cctgacagcctggccctggccaacaacagcaccctcaccatcggcaccatcgacgagatc
cagaagctgcatatccgcacagttccgctctacgagtctcccaggaagatctgctatcag
gaagtgtcccagtgcttcggggtcctctccagccggatcgaagtccaggacacgagtggt
ggcacaacggccctgaggcccagtgccagcacccaggccctgtccagcagcgtcagctct
agcaagctgttctccagcagcacggcgccacatgagacctcctttggggaagaggtggag
gtgcacaatctcctcatcattgaccagcacaccttcgaagtgcttcatgcccaccagttt
cttcagaatgagtatgccctcagcctggtctcctgcaagttgggcaaagaccccaacacg
tacttcatcgtgggcacggccatggtgtatcctgaagaggcggagcccaagcagggtcga
atcgtggtctttcagtattctgacggaaaactacagaccgtggctgagaaggaagtgaaa
ggagccgtgtactctatggtggaatttaatgggaagctattagccagcatcaacagcacg
gtgcggctctatgagtggacaacagaaaaggagctgcgcaccgagtgcaatcactacaac
aacatcatggcgctctacctgaagaccaagggcgacttcatcctggtgggcgacctgatg
cgctcagtgctgctgcttgcctacaagcccatggaggggaactttgaagagatcgctcga
gattttaatcccaactggatgagtgctgtggaaatcttggatgatgacaatttcctgggg
gccgaaaatgcctttaacttgtttgtgtgtcagaaggatagtgccgccaccaccgacgag
gagcggcagcacctccaggaggtgggtctcttccacctgggcgaattcgtcaacgtcttt
tgccacggctctctggtcatgcagaatctgggcgagacctccacccccacacagggctcg
gtgctcttcggcacggtcaacggcatgattgggctggtgacctcgctgtccgagagctgg
tacaacctcctgttggacatgcagaatcgactcaataaagtcatcaagagtgtgggcaag
atcgagcactccttctggagatcttttcatactgaacgaaagacagaaccagccacgggc
ttcatcgatggagacttgattgagagtttcctggacatcagcaggcccaagatgcaggag
gttgtggcaaacctacagtatgatgatggcagcgggatgaagcgagaggccacggcagac
gacctcatcaaggttgtggaggagctgacgcggatccattag

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