Ursus arctos (brown bear): 113247310
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Entry
113247310 CDS
T05909
Symbol
SHANK1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
uah
Ursus arctos (brown bear)
Pathway
uah04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
uah00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
113247310 (SHANK1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_5
SH3_2
PDZ_6
PDZ
SH3_1
SH3_9
FERM_f0
Motif
Other DBs
NCBI-GeneID:
113247310
NCBI-ProteinID:
XP_057170592
LinkDB
All DBs
Position
Unknown
AA seq
1924 aa
AA seq
DB search
MTHSPASSEDEERHSASECPEGGSESDSSPDGPSRGPRGTRGQGSGAPGSLASTRGLQGR
SMSVPDDAHFSMMVFRIGIPDLHQTKCLRFNPDATIWTAKQQVLCALSESLQDVLNYGLF
QPATSGRDANFLEEERLLREYPQSFEKGVPYLEFRYKTRVYKQTNLDEKQLAKLHTKTGL
KKFLEYVQLGTSDKVARLLDKGLDPNYHDSDSGETPLTLAAQTEGSVEVIRTLCLGGAHI
DFRARDGMTALHKAACARHCLALTALLDLGGSPNYKDRRGLTPLFHTAMVGGDPRCCELL
LYNRAQLGVADENGWQEIHQACQRGHSQHLEHLLFYGAEPGAQNASGNTALHICALYNKE
TCARILLYRGANKDVKNNNGQTPFQVAVIAGNFELGELIRNHREQDVVPFQESPKYAARR
RGPPGAGLTVPPALLRANSDTSMALPDWMVFAAPGTSSSGAPGPTSGPQGQSQPSAPSTK
LSSGTLRSASSPRGARARSPSRGRHPEEAKRQPRGRPSSSGTPREGPAGGTGGSGGPGGS
LGSRGRRRKLYSAVPGRSFMAVKSYQAQAEGEISLSKGEKIKVLSIGEGGFWEGQVKGRV
GWFPSDCLEEVANRSQEGKQESRSDKAKRLFRHYTVGSYDSFDAPSDYIIKEKTVLLQKK
DSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQN
VVKVGHRQVVNMIRQGGNTLMVKVVMVTRHPDMDEAVHKKAPQQAKRLPPPAISLRSKSM
TSELEEMVSPWKKKSEYEQQPAPVPSMEKKRTVYQMALNKLDEILAAAQQTISASESPGP
GGLASLGKHRPKGFFATESSFDPHHRSQPSYERPSYLPPGPGLMLRQKSIGAAEDDRPYL
APPAMKFSRSLSVPGSEDIPPPPTTSPPEPPYSTPPAPSSSGRLTPSPRGGPFNPSSGGP
LPSSSPASFDGPSLPDTRVGGREKSLYHSGPLPPAHHHPPHHHHHHAPPPQPHHHHAHPP
HPPEMETGGSPDDPPPRLALGPQPSLRGWRGGGPSPTPGAPSPSHHGGGGISSSQAPALR
YFQLPPRAASAAMYVPARSGRGRKGPLVKQTKVEGEPQKGGGLPPAPSPTSPASPQPPPT
AAAPSEKNSIPIPTIIIKAPSTSSSGRSSQGSSTEAEPPTQPEAAGGGGGGSSAPSPAPA
MSPVPPSPSPVPTPTSPSGPATLDFTSQFGAALVGAARREGGWQNEARRRSTLFLSTDAG
DEDGGDGGLGPGAPPGPRLRHSKSIDEGMFSAEPYLRLESAGAGSGGGYGAYGAGSRAYG
GSGGSSAFTSFLPPRPLVHPLTGKALDPASPLGLALAARERALKESSEGGGPPQPPPRPP
SPRYEAPPPTPHHHSPHAHHEPVLRLWGASPPDPARRELGYRAGLGSQEKSLPASPPAAR
RSLLHRLPPTAPGVGPLLLQLGPEPPPPHPGVSKAWRSGAPEEPERLPLHVRFLENCQPR
ASGAGGRGPPSEDGPGVPPPSPRRSVPPSPTSPRGSEENGLPLLVLPPPAPSVDVEDGEF
LFVEPLPPPLEFSNSFEKPESPLTPGPPHPLPDPPTPTTPLPPVPPPPVAAAPPTLDSTA
SSLTSYDSEVATLTQGAPVAPGDPPPPGPPAPAAPAPPAPQPGPDPPPGTDSGIEEVDSR
SSSDHPLETISSASTLSSLSAEGGGSAGGGGGGGGGASVASGPELLDTYVAYLDGQAFGG
SGTPGPPYPPQLMTPSKLRGRALGTGGGLRPGPSGGLRDPVTPTSPTVSVTGAGTDGLLA
LSGCTGPSTAGMAGGPVPIEPEGPPVPLPSASSLPRKLLPWEEGPGPPPPPLPGPLAQPQ
ASALATVKASIISELSSKLQQFGGSSAAGGALPWARGGSGGSGDSHHGGAGYVPERTSSL
QRQR
NT seq
5775 nt
NT seq
+upstream
nt +downstream
nt
atgacccacagccccgcgtcaagcgaggacgaggaacgccacagtgccagcgagtgtccc
gaagggggctcagagtccgacagctccccagacgggcccagcagaggcccccgggggacc
cggggccagggcagcggagcacctggtagtctggcctccacccgaggcctccagggccgc
tccatgtctgtcccggacgacgcccacttcagcatgatggtcttccggattggcatcccg
gacctgcaccagacaaaatgtctgcgcttcaaccccgatgccaccatctggacagccaag
cagcaggtgctctgcgccctgagcgagagcctgcaggatgtgctcaactacggtctgttc
cagccggccacctcaggccgcgatgccaactttctggaggaggaacggctgcttcgggag
tacccccagtcttttgagaagggggtgccctacctggagttccgatacaagacccgggtt
tacaaacagaccaacctggatgagaagcagctggccaaattgcacacgaagacggggttg
aagaagttcctggagtacgtgcagctcgggacgtccgacaaggtggcgaggctgctggac
aaggggctggaccccaattatcatgactcggattcaggagagacccccctgactctggct
gcccagactgaaggctccgtagaggtgattcgaaccctgtgcctgggaggggcccacatc
gacttccgggcccgggatggcatgacagcgctacacaaagctgcgtgtgcccgtcactgc
ctcgctctcacggcactcctggacctcgggggctcccccaactacaaggaccgccgaggc
ctgacccctctgttccacacggctatggtggggggcgacccccgctgctgcgagctgctg
ctgtacaacagagcccagctgggcgtcgctgatgagaacggctggcaggagattcaccag
gcctgccagcggggtcactctcagcacctggaacacctgctcttctacggggctgagccc
ggagcccagaacgcctcggggaacacggccttgcacatctgcgccctctacaataaggag
acctgcgctcggatcctcctctatcgaggggccaacaaggatgtgaagaataacaacgga
cagaccccattccaggtggcagtgatcgctgggaattttgaattgggggagctgatccga
aaccatcgagaacaggatgtggtgcccttccaggagtcccccaagtatgcagcccggcga
cggggacccccaggcgcagggctgacggtgcccccggcactgcttcgggccaacagtgat
accagcatggccctgcctgactggatggtgtttgccgccccggggacctcgtcctctggg
gcccccggccctacctcagggccccagggccagtcgcagccctcggctcccagcaccaag
ctcagcagtgggaccctccgaagtgccagcagcccccggggcgcccgggcccgctcccca
tcccgtgggaggcaccccgaagaggccaagaggcagccccgtggacggcccagctccagc
gggacgcccagggaagggccggcagggggcacggggggctcggggggccctgggggctcc
ctgggcagccgcgggaggcgcaggaagctctactcagcggtacccggacgctccttcatg
gccgtgaagtcctaccaggcccaagcggagggggagatctccctaagcaagggggagaag
atcaaagtgcttagcatcggggaaggaggcttctgggaaggccaggtcaaaggtcgcgtt
ggctggttcccctctgactgcctagaagaggtggcgaaccgctcccaggagggcaagcaa
gaaagccgcagtgacaaggcaaagagactcttccggcattataccgtgggctcctacgac
agctttgatgccccaagcgattacatcattaaagagaagacggtcttgctgcagaagaag
gacagtgaggggtttgggttcgtgcttcggggggccaaggcgcagacccccatcgaggag
ttcacccccaccccggccttcccggcgctgcagtatctggagtctgtggacgagggtggc
gtggcatggcgagctggactgaggatgggagacttcctcatcgaggtgaacgggcagaac
gtggtgaaggttggccaccggcaggtggtgaacatgatccgccaagggggcaacacgctg
atggtcaaggtggtgatggtcaccaggcacccggacatggatgaggctgtccataaaaaa
gcaccccagcaggctaagcggctcccgcccccagccatctctctgcgttccaagtctatg
acttcagagctggaggagatggtctccccctggaagaagaagagtgagtacgagcagcag
cctgcgccggtgcccagcatggagaaaaagcggaccgtgtatcagatggctctcaacaaa
ctggatgaaattttggcggcagcccagcagaccatcagtgcaagcgagagtcccggacct
ggtggccttgcgtcgctgggcaaacaccggcccaaaggcttctttgccacggagtcaagc
ttcgatccgcaccaccgctcacagccaagttatgaacgtccttcttacctgcctccggga
cctgggcttatgctccggcaaaaatctattggggctgcagaagatgatagaccctaccta
gctcccccagccatgaagttcagtcgcagcctgtctgtgcctggctcggaggacatcccc
ccgccgcccaccacgtccccaccggagcccccctacagcacacctccagccccctcctcc
tctggccgcctcaccccatcccccagaggggggcccttcaaccccagctcgggtggcccc
ctcccctcctcttcccccgcatcctttgatggaccctcccttcccgacacacgtgtaggg
ggccgtgagaagagcctgtaccacagcgggcccctgccccccgcccaccaccacccgccc
caccaccaccaccatcacgccccgcccccccagcctcaccaccaccacgcccacccccct
catcccccggagatggagacgggtggctctcccgacgaccccccaccccgactggctctg
gggccccagcccagcctgcgcggctggcggggcggcgggcctagccccaccccgggggcc
ccgtccccgtcgcaccatggcgggggcggcatcagctcctcccaggccccggccctgcgc
tacttccagctgcccccccgggcggccagcgcggccatgtacgtgccagcccgctcgggc
cgcgggcgcaaggggcccctggtcaagcagaccaaagtcgaaggcgagcctcagaagggc
ggcggcctccctcccgccccctcgcccacgtctccggcgtccccgcagccgccgccgacc
gcggccgccccctcggagaagaactccatccccatccctaccatcatcatcaaggctccg
tccaccagtagcagcggccgcagcagccagggcagcagcaccgaggcggaaccccccacc
cagcccgaggctgccggcggcggcggtggcggctcctcggcgccgagccccgccccggcc
atgtcgccggtgccgccgtccccctcgcccgtgcccacccctacctcgcccagcggcccc
gccaccctggatttcaccagccagttcggagcggccctggtgggggcggcccggagggaa
gggggctggcagaacgaagcccgccggcgatccacgctcttcctctccaccgacgcgggg
gacgaggatggcggcgacggcgggctgggcccaggggcgcccccgggtccccggctgcgc
cactcgaaatccatcgatgaaggcatgttctctgccgagccctacctccggctggagtct
gcaggcgcggggagtggcggcggctacggggcttacggggccggcagccgcgcctacggg
ggcagcgggggcagcagcgccttcaccagcttcctgccgccccgacctctggtccacccg
ctgaccggcaaggccctggaccccgcctccccgctcgggctggccctggcagcccgagag
cgggcgctgaaggagtcctcggagggtggtgggcccccccagccccctccaaggccccca
tcgccccgctacgaggccccgccgcccaccccacaccaccactcgccccacgcccaccat
gagccagtgctgcgtctctggggggcctcaccaccggaccccgcccgccgggagctgggg
taccgggcaggcctgggcagccaggagaagtcccttccggccagccctccagctgcccga
cgctccttgctgcaccgcttgccccctacagctcccggggtcgggcccctcctcctccag
ctggggccggagcccccgcccccacaccccggggtgagcaaggcgtggaggtcgggagcc
cccgaggagccagaacggctgcccctacacgtgcggttccttgagaactgccagcccaga
gccagtggggcggggggaaggggacccccctcggaagacgggccgggggttccgccgccc
agcccacgccggtccgtcccgccttcgccgacctccccgcggggcagtgaagagaatggg
cttcccctgctagtcctgccgccccctgctccctcggtggatgtggaagatggcgaattc
ctctttgtggaaccgctgcccccgcctctggagttctccaacagcttcgagaagccagag
tcgcccctcacacctgggcctccgcatccgctgccggacccacccaccccaaccacccca
ctgccccctgtgccaccacctcctgttgccgccgcacctcccaccctggactccacggca
tccagcctgacttcctatgacagtgaggtggccacactgacccagggggcccccgtggct
ccaggggacccccctccaccaggcccaccggccccggctgcccctgctccgccggccccg
cagcctggcccagacccaccgcctggcaccgattcgggtatcgaggaggtggacagtcgg
agcagcagtgaccaccctctggagaccatcagcagcgcgtccacactgagcagcctttct
gccgaaggcggtggcagcgccggaggcggtggtggtggcggcgggggggccagtgtggcc
agtgggccagagcttctggacacatacgtggcctacctggacggccaggccttcgggggg
agtggtactcctggcccaccgtatcccccgcagctcatgactccttctaagctccggggc
cgggctctggggaccggtggaggcctgaggcccggccctagtgggggactgcgggaccct
gtcactcccaccagccccaccgtctccgtgacaggggctggaacggatgggctgctggcc
ctgagcggttgcacaggaccttcaacggcgggtatggctgggggtccggtgcctatagag
ccggaaggcccgccggtgcccttgccatcagcctcctctctgcctcggaagctgctgccc
tgggaggagggcccgggcccaccgccaccacccctgcccgggcccctggcccagcctcag
gcctcagccttggccacagtaaaagccagcatcatcagtgaactcagctccaagcttcag
caatttgggggctcctcggcagctggtggcgctctgccctgggcccggggaggcagcggg
ggaagcggggacagccaccacgggggagccggctacgtcccagagaggacctcttccctg
cagaggcagaggtga
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