Ursus arctos (brown bear): 113252386
Help
Entry
113252386 CDS
T05909
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
uah
Ursus arctos (brown bear)
Pathway
uah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
uah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113252386 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uah03019
]
113252386 (EDC4)
Messenger RNA biogenesis [BR:
uah03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113252386 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
113252386 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
DUF445
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
Beta-prop_HPS5
WD40_Prp19
WDR55
Motif
Other DBs
NCBI-GeneID:
113252386
NCBI-ProteinID:
XP_044238389
LinkDB
All DBs
Position
Unknown
AA seq
1403 aa
AA seq
DB search
MASSCASIDIEDATQHLRDILKLDRPAGGPSGESQRPSNAYNGDLNGLLVPDPLCSGDGT
STNKPGLRAMPPINLQEKQVICLTGDDSSTCIGILAKEVEIVASSDSSISSKARGSNKVK
IQPVAKYDWEQKYYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERTLLKGFTGSV
ADLAFAHLNSSQLACLDEAGNLFVWRLALVNGKIQEEILVHIQQPEGTPLNHFRRIIWCP
FIPEESEDCCEEGSPTVALLHEDRAEVWDLDMLRSNHSTWPVRVSQIKQGFIVVKGHSTC
LSEGALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRSLSCLLFCDNHKK
QDPEVPFWRFLITGADQNRELKMWCTVSWTCLQTIRFSPDIFSSVSVPPSLKVCLDLSAE
YLILSDVQRKVLYVMELLQNQEEGRACFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLP
AEEENDSLGADGTHGAGAMESAAGVLIKLFCVHTKALQDVQIRFQPQLNPDVVAPLPTHT
THEDFTFPIAFGETRPELGSEGLGSSTQGSQPDPRRIVELPAPADFLSLSNETKPKLMTP
DAFMTPSTSLQQIAASPSSSSSSSSSSSSSSLTAVSAMSSTSAVDPSLPRPPEELTLSPK
LQLDGSLTMSSSSSLQASPRSLLPSLLPGPADKLTPKAPGQVPTAASALSLELQEVEPLG
LPQASPSRTRSPDVISSASTALSQDIPEIASEALSRGFVSSAPEGLEPDSMASAASALHL
LSPRPRPGPELGSQLGLDGGPGDGDRHSTPSLLEAALTQEATAPDSQVWPTAPDITRETC
SSLAESPRNGLQEKHKSLAFHRPPYHLLQQHDSQDASAEQSDHDDEVASLASAAGGFGTK
VPTPRLPAKDWKTKSSPRASPKLKRKGKKDDGDSAVGSRLMEHQVAEPPEDWPALIWQQQ
RELAELRHSQEELLQRLCTQLEGLQSTVTGHVERALESRHEQEQRRLERALAEGQQRGGQ
LQEQLTQQLSQALSSAVAGRLERSIRDEIKKTVPPCVSRSLEPVAGQLSNSVATKLTAVE
GSMKENISKLLKSKNLTDAIARAAADTLQGPMQAAYREAFQSVVLPAFEKSCQAMFQQIN
ESFRLGTQEYLQQLESHMKSRKAREQEAREPVLAQLRGLVSTLQGATEQMAATVSSSVRA
EVQHQLHVAVGSLQESILAQVQRIVKGEVSVALKEQQAAVTSSIMQAMRSAAGTPVPAAH
LDCQAQQAHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDPGQVFGQPPCPLSQPVL
LSLIQQLASDLGTRTDLKLSYLEEAVMHLDHSDPITRDHMGSVMAQVRQKLFQFLQAEPH
NSLGKVARRLSLMLHGLVTPSLP
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctcctgcgcgagcatcgacatcgaggacgccacgcagcacctgcgggacatc
ctcaagctggaccggcccgcggggggtcccagtggagagagccagcggccatctaatgcc
tacaatggggatctcaacgggcttcttgtcccagaccccctctgctcaggtgatggtact
tcaacaaacaagcctggtctccgggccatgccacctattaaccttcaggaaaagcaggtc
atctgtctcacaggagatgacagctctacgtgcattgggattttggccaaggaggtggag
attgtggccagcagtgactctagcatctcaagcaaagcccggggcagcaacaaggtgaag
atccagcctgtggccaagtatgactgggaacagaaatactactatggcaacctgattgct
gtgtccaactccttcttggcctatgccattcgggctgccaacaatggctcggcgatggta
cgggtgatcagtgtcagcacttcagagcggaccctgctgaagggcttcacaggcagtgtg
gctgatctggcctttgcacacctcaattcctcacagctggcctgcctggatgaggcaggc
aacctgtttgtgtggcgcttggcactggttaatggcaaaattcaagaagagatcttggtc
cacatccagcagccagagggcacaccactgaaccacttccgcaggatcatctggtgcccc
ttcatcccggaggagagtgaggactgctgtgaggagggcagccccacggtggctctgttg
catgaggaccgggctgaggtgtgggatctggacatgctccgctccaaccacagcacctgg
cctgtgcgtgtcagccaaatcaagcaaggcttcatcgtcgtaaaaggccacagcacttgc
ctgagtgaaggggccctctcacctgatgggactgtcctggctactgcaagccatgatggc
tttgtcaagttctggcagatctacattgaggggcaggacgagccaaggtgtctgcatgaa
tggaagcctcatgatgggcggtccctttcctgcctcctgttctgtgacaaccacaagaaa
caggaccctgaagtccctttctggaggttccttatcactggtgctgaccagaatcgggag
ctaaagatgtggtgcacagtgtcctggacctgcctgcagaccattcgcttctccccagat
atcttcagctcagtgagtgtgccccccagcctcaaggtttgtctggacctctcagcagaa
taccttattctcagcgatgtgcaacggaaggtcctctacgtgatggagctgctgcagaac
caggaggagggccgtgcctgcttcagctccatctcggagttcctgctcacccatcctgtg
ctgagcttcgggatccaggttgtgagtcgctgccgactgcggcacactgaggtgctgcct
gccgaggaggagaatgacagcctaggggctgatgggacccatggagctggtgccatggag
tctgcagctggggtgctcatcaaactcttctgtgtgcatactaaggcattgcaggacgtg
cagatccgtttccagccgcagctgaaccctgatgtggtggccccgctccccacccacact
acccacgaggacttcactttccccatagcatttggagagactcggcctgaactgggctct
gagggcctggggtcatctacccaaggctcccagcctgacccccgacgcatagtggagctg
cctgcacccgctgacttcctcagtctgagcaatgagaccaagcccaagctcatgacccct
gacgccttcatgacacctagcacctccctgcagcagattgctgcgtcccccagcagcagc
agcagctccagctccagctccagctcctcatctctcacagctgtgtctgctatgagcagt
acctcagccgtggacccctccttgcccaggccacctgaggagctgaccttgagccccaag
ctgcagctggatggcagtctgacaatgagcagcagtagcagcctgcaagcaagcccacgc
agcctcttgcccagtctgctcccaggtccagctgacaaactgactcccaaagcacctggg
caggtgcctactgctgcctctgcgctgtcactggagctgcaggaagtggagcccctgggg
ctaccccaggcttctcctagccgcacccgctcccctgatgttatctcctcagcttccact
gccctgtcccaggacatccctgagatcgcatctgaggccctgtcccgtggttttgtctcc
tctgctcctgagggtcttgagccagacagtatggcctcggctgcctcagcactacacctg
ctgtccccacggccccggccagggcccgagcttggctcccagcttggcctggatggaggc
cctggggatggggatcggcatagtaccccttcccttttggaggcagcactgacccaggag
gccacagcccctgacagtcaggtctggcccacggcaccagacattactcgtgagacctgc
agcagcctggcagagagtcccaggaatggcctccaggagaagcacaagagcctggccttc
caccgaccaccttatcacctgctgcagcaacacgacagccaggacgccagtgctgagcaa
agtgaccatgatgatgaggtggctagccttgcctctgctgcaggaggctttggcaccaaa
gttccgactccacggctaccggccaaggactggaagaccaagagttctcctcgagcctca
cccaagcttaagagaaagggcaagaaagatgacggggattcggctgtggggtcccggctc
atggagcaccaggtggcagaacctcctgaggactggccagcactaatttggcaacagcag
agagagctggcagagctgcggcacagccaggaagaattgctgcagcgtctttgcacccaa
cttgaaggcctgcaaagcactgtcacgggccacgtagaacgcgccctggagtcacggcat
gagcaggagcagcggcggctggagcgggcactggctgaggggcagcagcggggtgggcag
ctgcaagagcagctgacacagcagctgtcccaggcactgtcttcggctgtagcggggcgg
ctggagcgcagcatacgggatgagatcaagaagacggtgcctccatgtgtctctaggagt
ctggagccagtggcaggccagctgagcaactcagtggccaccaagctcacagccgtggag
ggtagcatgaaagagaatatctccaagctgctaaagtccaagaacttgacagatgccatt
gcccgagcagctgcagacacattacaggggccaatgcaggctgcctaccgtgaagccttc
cagagtgtggtgctgccggcctttgagaagagctgccaggccatgttccagcagatcaat
gagagcttccgactgggcacccaagaatacttgcagcagctggagagccacatgaagagc
aggaaggcacgtgaacaggaggcacgggagcctgtgttggcccagctgcggggcctggtc
agcacactgcagggtgccactgagcagatggcggccaccgtgtccagcagcgttcgggct
gaggtgcagcaccagctgcacgtggctgtgggcagcctgcaggagtccattttagcacag
gtacagcgcatcgttaagggtgaggtgagtgtagcactcaaggagcaacaggccgccgtc
acgtctagcatcatgcaggccatgcgttcagctgctggcacacctgtccccgctgcccac
ctcgactgccaggcccagcaagcccatatcctgcagctgctgcagcagggccacctcaat
caggccttccagcaggctctgacagctgctgacctgaacctggtgctgtatgtgtgtgaa
actgtggacccagggcaggtttttgggcagccaccctgcccactctcccagcctgtgctc
ctttccctcatccagcagctggcctctgaccttggtactcgaactgacctcaagctcagc
tacctggaagaggctgtgatgcacctggaccacagtgaccccatcactcgggaccacatg
ggctccgtcatggcccaggtgcgccagaagctcttccagttcctgcaggctgagccacac
aactcacttggcaaagtggcccggcgtctcagcctcatgctgcatggccttgtaacccct
agcctcccttag
DBGET
integrated database retrieval system
