Ursus arctos (brown bear): 113252470
Help
Entry
113252470 CDS
T05909
Symbol
SF3B3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
uah
Ursus arctos (brown bear)
Pathway
uah03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
uah00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113252470 (SF3B3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
uah03021
]
113252470 (SF3B3)
03041 Spliceosome [BR:
uah03041
]
113252470 (SF3B3)
03036 Chromosome and associated proteins [BR:
uah03036
]
113252470 (SF3B3)
Transcription machinery [BR:
uah03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
113252470 (SF3B3)
Spliceosome [BR:
uah03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
113252470 (SF3B3)
Complex B
113252470 (SF3B3)
Complex C
U2 SnRNP specific factors
113252470 (SF3B3)
Chromosome and associated proteins [BR:
uah03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
113252470 (SF3B3)
TFTC complex
113252470 (SF3B3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
113252470
NCBI-ProteinID:
XP_026350975
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG
DDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgttcctatacaatttgaccttgcagcgagccacaggcatcagctttgccattcatggc
aacttttctggaaccaaacagcaggaaattgttgtttcccgtgggaagatactggagctg
cttcgccctgaccccaacactggcaaagtacacactctactaactgtggaagtatttggt
gttatccggtcactcatggcctttaggctgacgggtggcaccaaagactacattgtggtt
ggcagtgactcgggtcggattgttatcttggaataccagccatctaagaatatgtttgag
aaaattcaccaagaaacctttgggaagagtggttgccgccgcatcgttcctggccagttc
ttagctgtggatcccaaagggcgagctgttatgattagtgccattgaaaaacagaaattg
gtatatatcttgaacagagatgctgcagcccggcttaccatttcatctcccctggaggcc
cataaagcgaatactttagtatatcatgtggttggagtagatgtgggatttgaaaatcca
atgtttgcttgtctagaaatggattatgaggaagcagacaatgatccaacaggggaagca
gcggctaatacccagcagactcttaccttctatgagttagaccttggtttaaatcatgtg
gtccgaaaatacagtgaacctttggaggaacatggcaattttcttattacagttcccgga
gggtcagatggtccaagtggagtgttaatctgctctgaaaactatatcacctacaagaac
tttggtgaccaaccggatatccgatgtccaattcccaggagacggaatgacctggatgac
cctgaaagaggaatgatttttgtctgctctgccacccataagaccaaatcaatgttcttc
tttttggcccaaactgagcagggagatatattcaagatcactttggagacagatgaagat
atggttactgagatccggctcaagtattttgatactgtgcctgttgctgctgccatgtgt
gtgcttaaaacaggcttcctttttgtagcatcagaatttggaaaccattacttatatcaa
attgcacatcttggagatgatgatgaagaacctgagttttcatctgccatgcctctggaa
gaaggagacacattcttcttccaaccaagaccactcaaaaaccttgtgctggttgatgaa
ttggacagcctctctcccattttgttttgccagatagctgatctggccaatgaagacaca
ccacagctctatgtggcctgtggtaggggaccccgatcatctctcagagtcctaaggcat
ggacttgaggtatcagaaatggctgtctctgagttacctggtaaccccaatgctgtctgg
acagtgcgtcggcacattgaagatgagtttgatgcctacatcattgtgtctttcgtgaat
gccacacttgtgttgtccattggagagactgtggaagaagtgactgactctgggttcctg
ggtaccaccccaaccttgtcctgctcgttgttaggggatgatgctttggtgcaggtgtat
cctgatggcattcggcacatacgagcagacaagcgagttaatgagtggaagacccctgga
aagaaaacgattgtgaaatgtgcagtgaaccagcgacaggtggtgatcgccctgacagga
ggagagctggtctattttgagatggatccttcaggacagctgaacgagtacacagagcgg
aaggagatgtcggcggatgtggtgtgcatgagtctggccaatgtgcctcctggagagcag
cggtctcgcttcctggctgtggggctggtggacaatactgtcagaatcatctctctggat
ccctcagactgtttgcagcctctgagcatgcaggctctcccagcccagcctgagtccttg
tgtattgtggaaatgggtgggactgagaagcaagatgagctgggtgagaggggctctatt
ggcttcctgtacctgaatattgggttacagaatggtgtactgctgagaactgtcctggac
cctgtcactggtgatctgtctgacacccgcactaggtacctggggtcccgtcctgtgaaa
ctcttccgtgtccggatgcaaggccaggaggcagtgttggccatgtcaagtcgatcatgg
ttgagctattcctaccagtctcgtttccatctcacccccttgtcttatgagaccctggag
tttgcgtctggcttcgcttctgaacagtgtcctgagggcattgtggccatctccacgaat
accctgaggattttagcgttggagaagctaggtgctgtctttaatcaagtagcctttcca
ctgcagtacacacccaggaaatttgtcattcaccctgagagtaacaatcttatcatcatt
gagacggaccacaatgcctacactgaggcaacaaaagctcagaggaagcagcagatggca
gaggaaatggtagaagcagcaggggaggatgagcgggagctcgctgcagagatggcagca
gcgttcctcaatgaaaaccttcctgagtccatttttggagctcctaaggctggcaatggg
cagtgggcctctgtgatccgagtgatgaatcctattcaagggaacactctggatcttgtc
cagctagaacagaatgaggccgcttttagcgtggctgtgtgcaggttctccaacactggt
gatgattggtatgtgttggtgggcgtggccaaagacctgatcctcaaccccaggtctgtg
gcagggggctttgtctatacctacaagctcgtgaacaatggggaaaaactggagttttta
cacaagactccagtagaagaggtccctgctgccattgccccgttccaggggagggtgttg
attggtgtggggaagcttctgcgagtttatgacctggggaagaaaaagttactccgaaag
tgtgagaacaagcatattgccaattacatctctgggatccagactattggacacagggta
attgtgtctgatgtccaagaaagtttcatctgggttcgatacaagcgtaatgagaaccag
cttatcattttcgccgatgatacttacccacgatgggtcactacagctagcctcctggac
tatgacactgtggctggggcagacaagtttggcaacatttgtgtggtgaggctcccacct
aacaccaatgacgaagtggatgaggatcccacaggaaacaaagccctgtgggaccggggt
ttgctcaatggggcctctcagaaggcagaggtgatcatgaactaccatgtgggcgagaca
gtgctgtcgttacagaagaccacactgatccctgggggctcagaatcactcgtctatacc
accttgtcaggaggaattgggatccttgtcccattcacatcccatgaggaccatgacttc
ttccaacatgtagaaatgcacctgcggtctgagcatccccctctctgtgggcgagaccac
ctcagctttcgttcctattacttccccgttaagaatgtgatagatggagatctctgtgag
cagttcaactctatggaacccaacaaacagaagaacgtctctgaagaactggaccgaacc
ccacctgaggtgtccaagaagcttgaagacatccggacccgctacgccttctga
DBGET
integrated database retrieval system
