Ursus arctos (brown bear): 113253925
Help
Entry
113253925 CDS
T05909
Symbol
COL6A6
Name
(RefSeq) collagen alpha-6(VI) chain isoform X1
KO
K06238
collagen type VI alpha
Organism
uah
Ursus arctos (brown bear)
Pathway
uah04151
PI3K-Akt signaling pathway
uah04510
Focal adhesion
uah04512
ECM-receptor interaction
uah04820
Cytoskeleton in muscle cells
uah04974
Protein digestion and absorption
uah05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
uah00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
113253925 (COL6A6)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113253925 (COL6A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113253925 (COL6A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
113253925 (COL6A6)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
113253925 (COL6A6)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
113253925 (COL6A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
uah04147
]
113253925 (COL6A6)
00536 Glycosaminoglycan binding proteins [BR:
uah00536
]
113253925 (COL6A6)
Exosome [BR:
uah04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
113253925 (COL6A6)
Glycosaminoglycan binding proteins [BR:
uah00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113253925 (COL6A6)
Hyaluronan
Extracellular matrix or blood plasma proteins
113253925 (COL6A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
vWA_SIBA-E
Integrin_beta
Motif
Other DBs
NCBI-GeneID:
113253925
NCBI-ProteinID:
XP_026352784
LinkDB
All DBs
Position
Unknown
AA seq
2267 aa
AA seq
DB search
MLLILFLIIICSYVSMNKDPGPEYADVVFLVDSSDHLGTKSFPLVKAFIHKTVSGLPVDA
HKYRVALAQYSDRLHSEFQLATFKSRNPMLNHLKKNFGFLGGSLRTGHALREAHRTFFSA
PAGGRDKKQFPPILVVLASAQSEDDVEEASKALREDGVRIVSVGLQSASEEELKAMATSR
FHFNLRSARDLGAFSQNMTQIIKEATQYRDGAADDILVEVCQGPSVADVVFLLDVSVNGS
QEDFEYLKEFLEESVSALDIKEHCMRVGLVTYSNETKVINSLSRGVNKSEVLQNIQNLSP
RAGKAYTGAAIRKIRKEVFSARNGSRKNQGVPQIAVLVTHRPSEDNVTKAAVNLRREGVT
IFTMGIEGASDSQLEKIASHPAEQHMSKLKTFSDLAAHNQTFLKKLRNQITHTVSVFSER
TETLKSGCVDTEEADIYLLIDGSGSTQATDFHEMKTFLSEVVGMFNIAPQKVRVGAVQYA
DSWDLEFEINKYTNKHDLGKAVENIRQMGGNTNTGAALNFTLGLLQKAKKQRGNRVPCHL
VVLTNGMSKDSILEPANRLREELVRVYAIGVKEANQTQLREIAGEEKRVYYVHDFDALKD
IRNQVVQEICAEEACKEMKADIMFLVDSSGSIGLENFIKMKTFMKNLVSKSQIGADRVQI
GVVQFSDVNKEEFQLNRYMSQNEISNAIDRMTHIGETTLTGSALTFVSQYFSPAKGARPN
VRRFLILITDGEAQDIVKDPAVALRQEGIIIYSVGVFGSNVTQLEEISGRPEMVFYVENF
DILQHIEDDLVFGICSPREECKRIEVLDVVFVIDSSGSIDHDEYSIMKDFMVDLVKKADV
GKNQVRFGALKYADDPEVLFYLGDLGSKWEVISVLQKDQPMGGNTYTAEALGFSDHMFTE
ARGSRLQKGVPQVLIVITDGESHDADKLNATAKALRDKGILVLAVGIAGANPVELLAMAG
SSDKYFFVETFGGLKGIFSDVSASVCNSSKVDCEIEKVDLVFLMDGSNSIHPDDFRKMKE
FLASVVQDFDVSVNRVRIGAAQFSHTYRPEFPLGTFVGKKEISFQIENIQQIFGYTHIGA
ALRQVGHYFRPDMGSRINAGTPQVLLVLTDGQSQDEVARAAEDLRHKGIDIYSVGIGDVD
DQQLIQITGTAEKKLTVHNFDELTKVKKRIVRNICTSGGESNCFVDVVVGFDISTHENGQ
TLLEGQSWIETYLQDLLHTISSLNGVSCEVGTETQVSVAFQVTNAMEKYSPKFEIYSENI
LNSLKDVTVKGPSLLNANLLSSLWDAFQNKSAARGKVVLLFSDGLDDDIEKLEQKSDELR
KEGLNALVTVALDGAADSSDLADLLYIEFGKGFEYRTQLTIGMRDLGSRLSKLLVNVAER
TCCCLFCKCIGGDGIMGDPGPPGKKGSPGFKGSEGYLGEEGIAGDRGAGGPVGEQGTKGC
DGAKGPKGNRGLNGQEGEVGESGIGGLHGEQGESGLPGEKGEKGDEGSQGSPGKRGVSGD
RGAKGQRGDPGVPGFDNTVEGPKGLKGERGRQGRRGWPGPPGTPGSRRKTAAHGRRGHTG
PQGKTGIPGPDGLEGSWGLKGPQGPRGETGVKGEKGGLGSEGPQGPPGPGGEAGSPGHLG
SQGNKGEPGDLGEKGAIGLPGPRGLPGDDGNPGYGSTGSRGAKGQEGFPGESGPKGETGD
PGGPGETGPKGARGKTISTGPPGEMGSPGEPGPPGRKGVKGARGLASFSMCELIQYVRDH
SPGGHGEPECPVHPTELVFALDQSRDVTKQEFERMKELMSSLVRGVRVRETSCPVGARIA
ILTYTSHARHLVRFSDAYRKPQLLREIEAIPYERSSDSREIGKVMRFISRNVFKRTLPGA
HTRRIATFFSSGQSADAQTIAAATMEFSALDIIPVVIAFSNVPSVKRAFAIDDTGTFQVI
MVPSGTDYAPALERLQRCTFCYDVCKPDAFCDQAKPPPAQSYMDAAFLLDSSRHVGSAEF
EDIRHFLGALLDHFEITPEPETSVTGDRVALLSHAPPNFLPNTQKSPVRTEFNLTTYNSK
RLMKRHLEESVQQLNGDAFIGQALQWTLDNIFLNAPNLRRNKVIFVISAGETSHLDKETL
KKESLRAKCQGYALFVFSLGPAWNDKELEDLASYPLDHHLVQLGRIHKPDHRYSVKIVRA
FINSIRRAINKYPPINFKIKCSRLSSTDLKQPPRQWRSFVPGPHKTALKEDALQKAKFFQ
DKKYLPRVARGSRDDTIRNLTRNTFHAFKNGKRVIKTAPNQHDKGSA
NT seq
6804 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgattttgttcctcataataatttgttcctatgtctctatgaacaaagatccc
ggccctgagtatgcggatgtcgtgttcctggtggacagctccgaccacctgggaactaag
tccttccccctcgtgaaagcgttcattcacaaaacggtcagcggtctgcccgtagacgcc
cacaagtaccgcgtggccctggcgcagtacagcgaccggctccacagcgagttccagctg
gccacgttcaagagcaggaaccccatgctgaaccacctcaagaagaacttcggcttcctt
ggcggctccctgcggaccggccacgctctccgggaggcgcacaggaccttcttctctgcg
ccggccggcgggagggacaagaagcagtttcccccgattctggtggtcctggcctcggcc
cagtccgaggatgacgtggaagaggcctccaaggccctgcgggaagacggggtgagaatc
gtctccgtggggctgcagagtgcttctgaggaggagctgaaggccatggccacctctcgg
tttcatttcaacctccggtcggccagggaccttggcgcgttttcccaaaacatgacgcag
atcatcaaggaggccacccagtacagggacggagcggccgatgatattcttgtggaagtc
tgccaaggcccgtctgtggctgacgtggtgttcctgttggatgtgtctgtcaatggcagc
caggaggactttgaatatcttaaggaattcctggaagagagtgtatctgctcttgacata
aaggaacactgcatgagggttggcctcgtgacctacagcaatgagaccaaggtgatcaat
tctctcagcaggggcgtaaataagtcagaggttctccagaatatacagaacctctctccg
cgggctgggaaggcttacacaggagctgccatcagaaagatcaggaaggaagtgttcagt
gcgcgcaacggcagtcggaagaatcagggggtgccccagattgccgtgctggtgacccac
agaccctcagaggataacgtgaccaaggcagccgttaacctccggcgcgagggcgtgacc
atcttcaccatgggcatcgagggggccagcgacagccagctggagaagatcgcctctcac
cccgccgagcagcacatgtccaaactgaaaaccttctccgacctggccgctcacaaccag
acgtttctgaagaagctgcggaaccagataacacacacagtctctgttttttcagaacgc
accgaaactctcaaatccggttgtgtggacactgaagaagcagacatttatctgctcatt
gacggctctggaagcacccaggccacagacttccacgaaatgaagaccttcctgtcagag
gtggtaggaatgttcaacatcgctccccaaaaggtgcgggttggggctgtccagtacgct
gacagctgggacttggaatttgagatcaacaaatacactaacaagcacgacttgggaaaa
gccgtcgagaacatccggcagatgggtgggaacacaaacacgggtgcagccctgaatttc
acactagggctcttgcaaaaagcaaagaaacagcgaggaaaccgagtgccctgtcatctt
gttgtcctgacgaatggcatgtccaaggatagcatcctggagccagcgaacagactgcga
gaagagctcgttcgtgtttatgccattggggtcaaggaggccaaccaaacacagctgcga
gaaattgcaggcgaggagaagagggtatactacgtgcatgacttcgatgctttgaaagac
ataaggaaccaagttgttcaagaaatctgtgctgaagaagcctgcaaagagatgaaagcg
gacatcatgtttctggtggacagttctggcagtataggactggaaaacttcatcaaaatg
aaaacattcatgaaaaacctggtgagcaaatctcagattggggcagatcgggtacaaatc
ggcgtagtccagttcagcgacgtcaataaggaggaatttcagctcaacagatatatgtcc
caaaatgaaatttcaaatgcaatagaccggatgactcacattggagaaaccaccttgacc
ggtagtgccctgacctttgtgtctcagtacttcagccctgccaagggggcccggcccaat
gtcaggaggtttctcatcctcatcactgacggtgaagctcaggacatagtcaaggaccca
gcagtcgcacttcgacaggaaggcataattatctactctgtgggggtgtttggttccaat
gtcacccagcttgaggaaatcagcgggaggccggagatggttttttatgttgagaatttt
gatattctgcagcacattgaagatgatcttgtttttggaatatgcagcccccgtgaagaa
tgcaagcggattgaagttttggatgttgtgtttgtaattgatagctctggaagcattgac
cacgatgaatatagtatcatgaaagactttatggttgacttggtgaaaaaagctgatgtc
ggcaagaatcaggtccggtttggggctctgaagtatgctgatgacccagaggtgctgttt
tatctgggtgaccttggctcaaaatgggaggtgatttcggtgctccagaaggaccagccc
atggggggcaacacttataccgcggaggcattaggcttctcagaccacatgttcactgaa
gcccggggcagccgtctgcagaaaggggtcccccaagtcctcattgtgatcaccgatggg
gagtcccatgatgcagataagctcaatgccacagccaaggccttgagggacaaaggcatt
cttgtcctggccgtggggattgctggtgccaatcctgtggagctgctagccatggcagga
tcgagtgacaagtacttctttgtggagacatttggaggcctgaaggggatattttcagat
gtgtcagccagtgtatgtaactcttcaaaagtagattgtgaaattgaaaaagtagatctt
gttttcctcatggatggctcaaatagcattcacccagatgacttcaggaagatgaaggaa
ttcttggcatcagttgttcaagacttcgatgtcagcgtcaacagagtgcgcataggtgct
gcccagtttagccacacctatcggccggaatttccactgggaactttcgtaggcaaaaag
gagatctcatttcagattgaaaacatccagcagatctttggatacacacacattggcgct
gccctccggcaggtggggcattacttccggccagacatgggtagccggataaatgcaggt
accccgcaggtgttgctggtcctcacagacggccagtcccaggatgaggtggcccgggcc
gctgaagacctgagacacaaagggattgacatttactcggtgggcattggcgacgtggat
gatcagcagctcattcaaatcactgggaccgcggaaaaaaaactgacggttcataacttt
gatgaactgacaaaggtcaagaaaaggatagttcgaaacatctgtacctcggggggtgag
agcaattgttttgtggacgttgtggtgggatttgacatctcaactcatgagaatgggcag
actttgcttgaaggtcaatcttggatagaaacctaccttcaagacctcttacataccatc
agctccctcaatggggtaagctgtgaggtgggtacagagacgcaagttagcgtggctttt
caagtgaccaatgccatggaaaaatattcacccaagtttgagatctatagcgaaaacata
ctgaacagcttgaaggatgtaacagtaaaaggaccatctcttctcaacgcaaacctcttg
agttctctatgggatgcatttcagaataaatcagctgctcgaggaaaggtggttctctta
ttttcagatggattggatgatgacattgaaaagcttgaacaaaaatctgatgaacttaga
aaagaaggcctgaatgccctcgtaactgttgctctggatggagccgctgattcaagtgac
ctggccgatcttctctacattgaattcgggaaagggtttgagtacaggacccagctgact
attggaatgagggaccttgggagccgactgtcaaaactactggttaatgttgctgaaagg
acatgctgttgtttattctgcaagtgcattggaggggatggcataatgggggatcctgga
ccaccagggaaaaagggatccccaggttttaaaggcagtgagggctatctgggagaggaa
ggcattgctggagacagaggagccggtggaccagtgggagagcaaggtactaagggatgc
gatggtgccaaaggtcctaagggaaacaggggactaaatggacaggagggagaagttgga
gaaagcggaattggaggattacatggagaacagggtgagagtggtcttcctggagaaaaa
ggagaaaagggtgatgaaggatcccagggaagcccaggaaagcgaggagtttctggtgac
cgaggtgcaaagggccagcgaggagaccctggagttcctggatttgacaataccgtagaa
ggacctaagggcttgaaaggagaacgtggaagacaaggtagaagaggctggccgggcccc
cctggaacaccaggctccagaagaaagacagcagctcatggccgaaggggacatacaggc
ccacaggggaaaacaggcatcccaggcccagatggacttgaaggctcatggggacttaag
ggccctcagggccccagaggagagactggtgtgaaaggtgaaaaaggaggtctgggaagt
gaaggtcctcaggggcctccgggaccaggaggagaagctgggagtccaggccatttggga
agccaaggaaataaaggagagcctggagatttgggagaaaaaggagcaattggtctccca
ggtcctcgaggcttgccgggtgatgatggcaacccaggttatggtagcactggaagtaga
ggagcaaaggggcaagaaggatttcctggagaaagtggaccgaagggtgagactggggac
cctggtggtccaggagaaactggacccaagggagctagaggcaagacgatatccactggg
cctccaggagagatgggatcccctggggagccaggacctcctggacgcaagggtgtgaaa
ggagccagaggattggcttcattttctatgtgtgagctcattcagtatgtacgggaccac
agccctggcggacatggagaaccagaatgcccggtgcatcccaccgaattggtgtttgcc
ttggaccagtctcgagatgtcaccaagcaggaattcgagcgcatgaaggagctgatgtct
tccctggtgaggggcgtccgggtccgggagaccagctgcccggtgggcgcgcgcatcgcc
atcctcacctatacctctcacgcccggcacctcgtccgcttctcagacgcctaccggaag
ccgcagctcctcagggagatcgaagctattccttacgagcggtcctcggacagcagggag
atcggcaaagtgatgaggttcatctccaggaacgtcttcaagcgaacgcttccaggcgcg
cacacgagaagaatcgccaccttcttcagcagcggtcagtctgccgatgcccagaccatt
gccgcggccactatggaattcagtgcccttgacatcattccggtcgtgatcgcgttcagc
aacgtgccctccgtcaagcgtgcgtttgcgattgatgacactggcacattccaagtcata
atggttccatccgggaccgactacgcgccagcgttagagagactccagcggtgcactttc
tgctatgatgtctgcaagccagacgctttttgcgatcaagccaaaccgccccctgcacag
tcttacatggatgctgcgttccttctggacagctcccggcatgtgggaagtgctgaattt
gaagacataagacactttttgggagcactgttagatcactttgagatcaccccagagcct
gagacctctgtcactggagatcgggtggccctattaagccatgctccccccaacttccta
cccaacactcagaagagtcctgttagaactgagttcaacctcaccacctacaacagtaaa
cgcctcatgaagaggcacctggaagaatcagtgcaacaactaaatggagacgctttcatt
ggtcaggccttacagtggaccctggacaatatctttttaaatgctcccaatctgagaaga
aacaaagtcatatttgtgatctctgctggggaaaccagtcacttggacaaggagacctta
aagaaagaatccttgagagccaaatgtcaaggttatgccctatttgtgttttcccttggc
cctgcttggaatgacaaggaactagaagatctagccagctaccctttggatcaccacttg
gtccagcttggccgaattcataaacctgaccacagatacagtgtgaagattgtgagagcc
tttataaactcaatcaggcgtgcaatcaacaaatacccaccaataaacttcaaaatcaag
tgcagtagactcagctctacagatctgaagcagcccccacggcagtggcgaagctttgtt
cctggaccacataaaactgccctcaaagaagatgcattacagaaggcaaagttctttcaa
gataaaaaatatcttccaagagtagcaagaggcagcagagatgatactattcgaaatctt
accagaaacacattccatgcctttaaaaatggaaaaagggtgataaaaactgctccaaac
caacatgacaaaggaagtgcttga
DBGET
integrated database retrieval system
