KEGG   Ursus arctos (brown bear): 113254001
Entry
113254001         CDS       T05909                                 
Symbol
TRIM42
Name
(RefSeq) tripartite motif-containing protein 42
  KO
K12018  tripartite motif-containing protein 42
Organism
uah  Ursus arctos (brown bear)
Brite
KEGG Orthology (KO) [BR:uah00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:uah01009]
    113254001 (TRIM42)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:uah04121]
    113254001 (TRIM42)
Protein phosphatases and associated proteins [BR:uah01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     113254001 (TRIM42)
Ubiquitin system [BR:uah04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    113254001 (TRIM42)
SSDB
Motif
Pfam: fn3 zf-B_box Pur_ac_phosph_N Ig_DSCAM-DSCAML_C CHDCT2
Other DBs
NCBI-GeneID: 113254001
NCBI-ProteinID: XP_026352930
LinkDB
Position
Unknown
AA seq 724 aa
METAMCVCSPCCTWQRCCPRLCSCLCCKFLFTSERNCTCFPCPYKDERNCQCCHCTCSEN
PNCHWCCCSWANDPNCKCCCTTSSNLQCYYYESRCCRNATITFRKGRLRSIRTSSKTALR
IGSSDTQVDEVKTTPTNSNLVDHLSCPMCSRLRLHSFMLPCNHSLCEKCLRQLQKHAEVT
ENFFILICPVCNRSHCMPYTHKMQLPENYLRGRLTKRYMQQHGYLKWRFDRSSGPIVCQV
CRNRRIAYKRCITCRLNLCNDCLKTFHSDVAMQDHVFVDTSTEDQDEKICIHHPSSRIIE
YCRHDNQLLCTFCKTAFHNGHDTVSLIDACSERAAALFSAIAKFKAVRYEIDNDLMEFNI
LKNSFKADKEVKRKEIRNGFLKLRSILQEKEKSIMEQIENLEVSRQKEIEKYVYVTTMKV
NEMDGLIAYSKEALKETGQVAFLQSAKILVDQIEDGIQSTYRPDPQLRLHSLNCMPLDFA
ELSSAIHELFPTGPKKVCSSGDSLPSPYPMHSEMMIARKVTFSTHSFGNQQIYQRSSSLL
SFNTTTGEKAKMGLEAYGRAQSATPAKPTDGLYTYWSAGADNQSVQNSSSFHNWYSFNDG
TVKTPGPIVIYQTLVYPRAAKVYWTCPTEDVDSFEMEFYELITTPPNNVRTELCGQIRDI
MQQNLELHNLTPNTEYLFKVRAINDNGPGQWSDICKVVTPDGRGKNRAKWGLLKNIQTAL
QKRF
NT seq 2175 nt   +upstreamnt  +downstreamnt
atggagactgctatgtgtgtttgctctccatgctgtacgtggcagagatgttgtcctcga
ttatgctcctgtctgtgctgcaagttcctcttcacctcggagcggaactgcacctgcttc
ccctgcccctacaaggacgagcgcaactgccagtgctgccactgcacctgctctgagaac
cccaactgccactggtgctgctgctcctgggccaatgaccccaactgcaagtgctgctgc
acgacaagcagcaacctccagtgctactactacgagagccgctgctgccgcaatgccacc
atcacgttccgcaagggccgcctcaggagcatccgcacctcctccaagaccgcactgcgt
atcgggagcagcgacacccaggtggatgaggtgaagacgacgcccacgaacagcaacctg
gtggaccatctctcgtgccccatgtgcagccggctgcgcctgcactcgttcatgctgccc
tgcaaccacagcctgtgcgagaagtgcctgcgacagctgcaaaagcacgctgaggtcacc
gagaacttcttcatcctcatctgccccgtgtgcaaccgctcgcactgcatgccctacacc
cacaagatgcagctgcccgagaactacctgcgcgggcgcctcaccaagcgctacatgcag
cagcacggctacctcaagtggcgcttcgaccgctcctccgggcccatcgtctgccaggtc
tgccgcaaccggcgcatcgcctacaagcgctgcatcacctgccgtctcaacctgtgtaac
gactgcctcaagaccttccactcggacgtggccatgcaggaccacgtcttcgtggacaca
agcaccgaggaccaggatgagaagatctgcatccaccacccgtccagccgcatcattgag
tactgccgccacgacaaccagctgctctgcaccttctgcaagacggctttccacaacggc
cacgacaccgtcagcctcatcgacgcctgctccgaaagggccgccgcgctcttcagcgcc
atcgccaagttcaaagcagtccgctatgagattgataatgacctaatggagttcaacatt
ttaaagaacagctttaaagctgacaaggaggtgaagcgaaaagagatccgaaatggattt
ctcaagctgcgcagcattctacaggagaaggagaagtccatcatggagcaaatagagaat
ctggaggtgtccaggcagaaggagattgaaaaatacgtgtatgtcacaaccatgaaagtg
aatgaaatggacggcctgatcgcctactccaaggaagccctgaaagagacaggccaggtg
gcgttcctgcagtctgccaagattctggtggaccagatcgaagatggcatccagagcaca
tacaggcctgacccacagctccggctacactccttgaactgcatgcctttggactttgct
gagctctccagtgccatccacgagctcttccccacaggacccaagaaggtatgctcttca
ggggactccctgccctccccctatcccatgcactcagaaatgatgattgccaggaaggtc
actttcagcactcacagttttggcaaccagcagatataccagcgaagctcctccttgttg
tccttcaacaccaccaccggtgagaaggccaagatgggtctggaagcctatgggcgagcc
cagtccgccacacctgccaaacccacagatggcctctatacctactggagtgcaggggca
gacaaccagtctgtgcagaacagcagcagcttccacaattggtactcattcaatgatggt
actgtgaagaccccaggcccaattgttatctaccagactctggtgtatcctagagctgcc
aaggtttactggacatgcccaacagaagacgtggactcttttgagatggaattttatgaa
ctcattactacccctcctaacaatgtgcggacagagctttgtgggcaaattcgggatata
atgcagcagaatctggagctgcacaacctgacccccaacactgagtatctgtttaaagtt
agagccatcaatgacaatggtcctgggcaatggagtgacatctgcaaggtggtaaccccg
gatgggcgtgggaagaaccgagctaagtggggcctgctgaagaacatccagactgccctc
cagaagcgcttctga

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