Ursus arctos (brown bear): 113255230
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Entry
113255230 CDS
T05909
Symbol
TNPO1
Name
(RefSeq) transportin-1 isoform X1
KO
K18752
transportin-1
Organism
uah
Ursus arctos (brown bear)
Pathway
uah03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
uah00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113255230 (TNPO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uah03019
]
113255230 (TNPO1)
03009 Ribosome biogenesis [BR:
uah03009
]
113255230 (TNPO1)
Messenger RNA biogenesis [BR:
uah03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
113255230 (TNPO1)
Ribosome biogenesis [BR:
uah03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
113255230 (TNPO1)
Pre-60S particles
113255230 (TNPO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_GCN1
TPR_IMB1
HEAT_2
Arm
Vac14_Fab1_bd
TOR1L1_N
IBN_N
Cnd1
TPR_IPO5
HEAT_EF3_N
HEAT_MROH2B_C
TPR_DNAAF5
PDS5
Adaptin_N
MMS19_C
CEP104-like_TOG
HEAT_GCN1_C
Ltn1_1st
HEAT_Maestro
HEAT_GCN1_C_2
INTS7_N
UNC45-central
TPR_TTI1_C
Dopey_N
RTP1_C1
VPS15-like_hel
DUF3689
Motif
Other DBs
NCBI-GeneID:
113255230
NCBI-ProteinID:
XP_026354595
LinkDB
All DBs
Position
Unknown
AA seq
898 aa
AA seq
DB search
MVWDRQTKMEYEWKPDEQGLQQILQLLKESQSPDTTIQRTVQQKLEQLNQYPDFNNYLIF
VLTKLKSEDEPTRSLSGLILKNNVKAHFQNFPNGVTDFIKSECLNNIGDSSPLIRATVGI
LITTIASKGELQNWPDLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDVLDRPL
NIMIPKFLQFFKHSSPKIRSHAVACVNQFIISRTQALMLHIDSFIENLFALAGDEEPEVR
KNVCRALVMLLEVRMDRLLPHMHNIVEYMLQRTQDQDENVALEACEFWLTLAEQPICKDV
LVRHLPKLIPVLVNGMKYSDIDIILLKGDVEEDETIPDSEQDIRPRFHRSRTVAQQHDED
GIEEEDDDDDEIDDDDTISDWNLRKCSAAALDVLANVYRDELLPHILPLLKELLFHHEWV
VKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQ
PPDTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSK
YQHKNLLILYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNMLKDEDKDLFPLLECLSS
VATALQSGFLPYCEPVYQRCVNLVQKTLAQAMLNNAQPDQYEAPDKDFMIVALDLLSGLA
EGLGGNIEQLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPI
LGTNLNPEFISVCNNATWAIGEISIQMGIEMQPYIPMVLHQLVEIINRPNTPKTLLENTA
ITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMISVNPSGVIQDF
IFFCDAVASWINPKDDLRDMFCKILHGFKNQVGDENWRRFSDQFPLPLKERLAAFYGV
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atggtgtgggaccggcaaaccaagatggagtatgagtggaaacctgacgagcaagggctt
cagcaaatcctgcagctgctgaaggagtcccagtccccagacaccaccatccagagaacc
gtgcaacaaaaactggaacaactcaatcaatatccagattttaacaactacctgattttt
gttcttacaaaattaaaatctgaagacgaacccacaagatcattaagtggtctcattttg
aagaataacgtgaaagcacattttcagaacttcccaaatggtgtgacagactttattaag
agtgaatgtttaaacaatattggtgactcctctcctttgattagagccactgtaggtatt
ttgattacaaccatagcttccaagggagaattgcagaattggcctgacctcctaccaaaa
ctctgtagcctcttggattctgaagattacaacacttgtgagggagcatttggcgccctt
cagaagatctgtgaagattctgctgagattttagatagtgatgtgttagatcgtcctctc
aacatcatgatccccaaatttttacagtttttcaagcacagtagtccaaaaataaggtct
catgccgttgcatgtgtcaatcagtttatcatcagtaggactcaagcgctgatgttgcac
attgattcttttattgagaacctctttgcattggctggtgatgaagaaccagaggtacgg
aaaaatgtgtgccgggcacttgtgatgttgcttgaagttcgaatggatcgcctgcttcct
cacatgcataacatagttgagtacatgctacagaggacgcaagatcaagatgaaaatgtg
gctttagaagcctgtgaattctggctcactttggctgagcaacccatatgcaaagatgta
ctcgtaaggcatcttcccaaattgattcctgtattagtgaatggcatgaagtactcagat
atagatattatcctacttaagggtgatgttgaagaagatgaaacaattcctgatagtgaa
caggatataaggccccgttttcatcggtcgaggacagtggctcagcagcatgatgaagat
ggaattgaagaggaagatgatgacgacgatgaaattgatgatgatgatacaatttctgac
tggaatctaagaaaatgttctgctgctgccctagatgttcttgcaaatgtgtatcgtgat
gagcttttgccacacattttgccccttttgaaagaattactttttcatcatgaatgggtt
gttaaagaatccggcatcttggttttaggagcaattgctgaaggttgtatgcaaggcatg
attccatacctgcctgagctcattcctcaccttattcagtgcctctctgataaaaaggct
cttgtgcgttccataacgtgctggactcttagccgctatgcacattgggtagtcagccag
ccccccgatacgtacctgaagccattaatgacagaattgctaaagcgaatcctggacagc
aacaagagagtacaagaagctgcctgcagtgcctttgctaccttagaagaggaggcttgt
acggaacttgttccttaccttgcttatatacttgataccttggtcttcgcatttagtaaa
taccagcataagaacctgctcattctttatgatgccataggaactttagcagattcagta
ggacatcatttaaacaaaccagaatatattcagatgctaatgcctccactgatccagaaa
tggaacatgttaaaggatgaagataaagatctcttccctttacttgagtgcctatcttca
gttgccacagccctgcagtctggtttccttccatactgtgaacccgtgtaccagcgttgt
gtaaacctagtacagaagactcttgcacaagccatgctgaacaatgctcaaccagatcaa
tatgaggctcctgataaagattttatgatagtggctctggatttactcagcggcctagct
gaaggacttggaggcaacatcgaacaactagtagcccgaagtaacattctaacactaatg
tatcagtgcatgcaggataaaatgccggaagttcgacagagttccttcgccctgttaggt
gacctgacgaaagcttgctttcagcatgttaagccttgtatagctgatttcatgcctata
ttgggaaccaacctaaatccagagttcatttcagtctgcaataatgccacatgggcaatt
ggagaaatctccattcaaatgggtatagagatgcagccttatattcctatggtgttgcac
cagcttgtagaaatcattaacagacccaacacaccaaagacgttgttagagaatacagca
ataacaattggtcgtcttggttacgtttgtcctcaagaggtggcccccatgctacagcag
tttataagaccctggtgcacctctctgagaaatataagggacaatgaggaaaaggattca
gcatttcgtgggatttgtaccatgatcagtgtgaatcccagtggagtaatccaagatttt
atatttttttgtgatgctgttgcatcgtggattaacccaaaagatgatctgagagacatg
ttctgtaagatccttcatggatttaaaaatcaagttggggatgaaaattggaggcgtttc
tctgaccagtttccgcttcccttaaaagagcgtcttgcagctttttacggtgtttaa
DBGET
integrated database retrieval system
