Ursus arctos (brown bear): 113258643
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Entry
113258643 CDS
T05909
Symbol
PABPC1L
Name
(RefSeq) polyadenylate-binding protein 1-like
KO
K13126
polyadenylate-binding protein
Organism
uah
Ursus arctos (brown bear)
Pathway
uah03015
mRNA surveillance pathway
uah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
uah00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113258643 (PABPC1L)
09123 Folding, sorting and degradation
03018 RNA degradation
113258643 (PABPC1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uah03019
]
113258643 (PABPC1L)
03041 Spliceosome [BR:
uah03041
]
113258643 (PABPC1L)
Messenger RNA biogenesis [BR:
uah03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
113258643 (PABPC1L)
mRNA cycle factors
Stress granule specific factors
113258643 (PABPC1L)
Spliceosome [BR:
uah03041
]
Complex C
Other components
Complex C specific factors
113258643 (PABPC1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_5
RRM_MARF1
Motif
Other DBs
NCBI-GeneID:
113258643
NCBI-ProteinID:
XP_026359378
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
MNASGPGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQ
QPADAERALDTMNFEVIKGQPVRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFS
TFGNILSCKVVCDDHGSRGFGFVHFETHEAAQQAIATMNGMLLNDRKVFVGHFKSRRERE
AELGARAVEFTNIYVKNLHVDVDEQGLQDLFSQFGKMLSVKVMRDDIGHSRGFGFVNFEK
HEEAQKAVTDMNGKEVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRATRYQGVNLYVKN
LDDSIDDEKLRKEFSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGT
KPLYVALAQRKEERKAILTNQYMQRLSTVRALGGPLLGSFQQPASYFLPAVPQPPAQAAY
YASGPSVQPAPRWTAQPPRVSSTYPPAASMVRPPAMLRRPPAQVSSVRQASTQVPPPGPH
TQRVANIGTQTTGASGVAYSTPTGPVLTHKYSSATHNPGVQEPAVRIPGQEPLTASMLAA
APLHEQKQMIGERLYPLIYDTHTQLAGKITGMLLEIDNSELLLMLESPESLNAKVEEALA
VLQAHQATELTAVNVL
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccagcggcccgggctacccgctcgcctcgctctacgtgggcgacctgcacccc
gacgtgaccgaggccatgctgtacgagaagttctcgcccgccggccccatcctgtccatc
cgcgtgtgccgcgacgtggccacccgccgctcgctgggctacgcctacatcaacttccag
cagccggccgacgcggagcgggcgctggacacgatgaactttgaagtgatcaaaggccag
cctgtccgcatcatgtggtcccagcgagacccaggactccgcaagtcaggtgtgggcaac
atcttcatcaagaacctggaggactccattgacaacaaggccttatatgacaccttctcc
acctttgggaacatcttgtcttgcaaggtggtgtgtgacgatcatgggtcccggggcttc
ggctttgtccactttgagacccacgaggctgcgcagcaggccattgccaccatgaacggg
atgctgctgaatgaccgcaaagtcttcgtgggccacttcaagtcccgacgggagcgggaa
gcagagctgggagctcgggccgtggagttcaccaacatttatgtgaagaacctccatgtg
gacgtggacgagcagggcctgcaggacctcttctcccagtttgggaaaatgctgagtgtg
aaggtgatgagggacgacatcggccactcccgaggcttcggctttgtcaactttgagaag
cacgaagaagcccagaaggctgtgacggacatgaatgggaaggaggtgagcgggcggctg
ctgtacgtgggccgggcccagaagcgggtggaacggcagaatgagctgaagcgtaggttc
gagcagatgaagcaggaccgggcgacccgttaccagggcgtgaacctgtacgttaagaac
ctggatgactccatcgatgatgagaagctgagaaaagagttctctccctatggcgtgatt
accagcgctaaggtgatgacagagggtggccacagcaaggggtttggctttgtgtgtttt
tcctccccagaagaggcgacgaaggccgtgaccgagatgaacgggcgcatcgtgggcacc
aagccgctgtacgtggcactggcccagcgcaaagaggagcggaaggccatcctgaccaac
cagtacatgcagcgtctctccacggtgcgggctctgggcggccccctcttgggctccttc
cagcagcccgccagctacttcctgcccgccgtgccccagcctccagcccaggctgcgtac
tatgcctccggcccctccgtgcagcccgcccccaggtggacggcccagcctccgagagtc
tcctccacctaccctccagctgcctcaatggtccggccaccagccatgttgcggcgcccc
ccggcccaggtcagcagtgtcaggcaggcctctacccaggtgccacccccggggccccac
acccaaagagtggccaacattggtacccagaccacaggagccagcggggtggcatattct
accccaaccgggcctgtcctgacacacaaatattcctcagcaacacacaaccctggggtg
caggagccggctgtgcgcatcccgggacaggagcccctgacggcgtccatgctggccgcg
gccccactgcacgagcaaaagcagatgattggtgagcgtctgtaccccctcatctacgat
acccacacccagctggccggcaagatcacgggcatgctgctggagatcgacaactcagag
ctgctgctcatgctggagtcccccgagtccctcaacgccaaggtggaagaggctctggca
gtgctgcaggcacatcaggccacggagctgacggccgtgaacgtgctctga
DBGET
integrated database retrieval system
