Ursus arctos (brown bear): 113258871
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Entry
113258871 CDS
T05909
Symbol
CSTF2T
Name
(RefSeq) cleavage stimulation factor subunit 2 tau variant
KO
K14407
cleavage stimulation factor subunit 2
Organism
uah
Ursus arctos (brown bear)
Pathway
uah03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
uah00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113258871 (CSTF2T)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uah03019
]
113258871 (CSTF2T)
Messenger RNA biogenesis [BR:
uah03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
113258871 (CSTF2T)
U7-dependent histone pre-mRNA processing factors
113258871 (CSTF2T)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
113258871
NCBI-ProteinID:
XP_026359762
LinkDB
All DBs
Position
Unknown
AA seq
638 aa
AA seq
DB search
MSSLAVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGPAAPIIDSPYGDPID
PEDAPESITRAVASLPPEQMFELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMR
IMDPEIALKILHRKIHVTPLIPGKSQPVSGPGPGPGPGLCPGPSVLLNQQNPSAPQPQHM
ARRPVKDIPPLMQTPIQGGIPAPGPISAAVPGPGPGALTPGGGMQPQVGMPGVGPVPLER
GQVQMSDPRAPIPRGPMTAGGLPPRGLLGDAPNDPRGGTLLSVTGEVEPRGYLGPPHQGP
PMHHASGHDGRGPSSHEMRGGPLADPRLLIGEPRGPMIDQRGLPMDGRGSRDSRGMETRA
METEVLETRVMERRGMETCAMETRGMEARGIDARGMEIRGPGPSSRGPMTGGIQGPGPIN
MGAGGPQGPRQVSSISGVGNPGAGMQGAGIQGAGMQGAGMQGAGIQGTGIQGAGIQGTGM
QGTGIQGTGMQGAGIQAVGMQGAGIQGTGMQGAGKQGGGQASSFSPGQSQVTPQDQEKAA
LIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAS
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtctggcggtgagagacccggcgatggatcggtcgctgcgttccgtgttcgtg
gggaacattccgtacgaggccaccgaggagcagctgaaggacattttctcggaggtgggt
tcggtcgtcagcttccggctggtgtacgaccgcgaaacgggtaagcccaagggctatggc
ttctgcgagtaccaggaccaggagaccgcgctcagtgccatgcggaacctcaacgggcgc
gagtttagcggaagggcgctgcgggtggacaacgccgccagcgagaagaacaaggaggag
ctcaagagcctcgggcctgcggcgcccatcatcgactccccatacggggaccccatcgac
cccgaggacgcccccgagtccatcaccagggcggtcgccagcctgcccccggagcagatg
ttcgagctcatgaagcagatgaagctgtgtgtgcagaacagtcaccaggaagcgcggaac
atgctgctccagaacccgcagctggcctatgcgctgctgcaggcccaggtggtcatgagg
atcatggaccccgagatcgcgctgaagatcctgcatcgcaagatacatgtcacaccgctg
attccgggcaaatcccagcctgtctccggccccggccccggccctggccccggcctctgc
cccggccccagtgttctgctcaaccagcagaacccttccgccccgcagcctcagcatatg
gccagaagacccgtcaaagacatccctcctctgatgcagaccccgatccagggggggatt
ccggccccgggccccatttcagccgcggttcccggacctgggcctggtgccttaactcct
ggtggaggaatgcagccccaggttggaatgccaggcgtgggtccagtcccgttagagcgg
ggacaggtgcagatgtcggatcctagagctcctatacctcgtgggcctatgactgccggg
ggcctccctcctcgaggactgttgggagatgctccaaacgacccacgtggagggactctg
ctttcagtcactggagaagtagagcccagaggctatcttggcccacctcatcagggcccc
cccatgcaccatgcctctggtcatgacggccgtggcccttcctcacatgagatgagggga
gggccattagcagatcccagactgctgattggagagcccaggggacccatgatagatcag
aggggactccctatggatggtagaggtagtagagattctcgagggatggagactcgagcc
atggagactgaagtcttagagacacgagtaatggagagaaggggaatggagacctgtgcg
atggaaaccagagggatggaagcgagaggcatagacgcaagagggatggagatacggggc
cctggccccagttccagaggccctatgactggtggaatccagggacctgggcccattaat
atgggggcaggtggtcctcagggacctagacaggtctcaagcatttcaggggtgggaaat
cctggagctggcatgcagggggcaggcatacaaggagcgggcatgcagggagcaggcatg
caaggggcgggcatacaagggacaggcatacagggagcgggcatacaagggacaggcatg
caggggacgggcatacaagggacaggcatgcagggggcgggcatacaagcagtgggcatg
cagggggcgggcatacagggaacaggcatgcagggagcgggcaagcaaggtggaggccag
gctagcagtttcagtcctgggcagagccaggtaaccccacaggatcaagaaaaggcagct
ctgatcatgcaggttcttcagctgactgcagatcagattgccatgctgcctcctgagcaa
aggcagagcatcctaattttaaaggaacaaattcagaaatctactggggcttcttga
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