KEGG   Ursus arctos (brown bear): 113259051
Entry
113259051         CDS       T05909                                 
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X2
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
uah  Ursus arctos (brown bear)
Pathway
uah03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:uah00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    113259051
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:uah03021]
    113259051
   03036 Chromosome and associated proteins [BR:uah03036]
    113259051
Transcription machinery [BR:uah03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     113259051
   Coactivators
    SAGA/TFTC/STAGA complex
     113259051
Chromosome and associated proteins [BR:uah03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     113259051
    STAGA complex
     113259051
    TFTC complex
     113259051
    SAGA complex
     113259051
    SLIK complex
     113259051
SSDB
Motif
Pfam: TFIID_NTD2 WD40 vATP-synt_AC39 WD40_Prp19 ODR4-like Beta-prop_EML_2
Other DBs
NCBI-GeneID: 113259051
NCBI-ProteinID: XP_026360000
LinkDB
Position
Unknown
AA seq 325 aa
MKRVRTEQIQMAVSCYLKRRQYVDSDGPLKQGLRLSQTAEEMAANLTVQSESGCANIVSA
APCQAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLNLVQNSPKSTVESFY
SRFHGMFLQNASQKDVIEQLQTTQTIQDILSNFKLRAFLDNKYVVRLQEDSYNYLIRYLQ
SDNNTALCKVLTLHIHLDVQPAKRTDYQLYASGSSSRSEGNGLEPTDMPAPILQNEAALE
VLQESIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPDSKLLAAGFDNSCIKLWSLRSK
KLKSEPHQVDVSRIHLACDILEEEV
NT seq 978 nt   +upstreamnt  +downstreamnt
atgaaacgagtgcgcaccgagcagattcagatggcagtgtcctgctacctcaaacgccgg
cagtacgtggactccgacggtcccctgaagcaaggactgaggctgtcacagaccgctgag
gagatggcggccaacctcacagtccaatcagaatccggttgtgccaacatagtgtctgca
gccccttgccaggcagagccccagcaatatgaagtacagtttggacgactacggaatttt
ctcactgattctgattcccagcatagccacgaagtgatgcctctcctctatcctctcttt
gtctacctccatctcaacctggtccagaatagtccgaagagcacagtggaaagtttttac
agccgcttccatggaatgtttctgcagaacgctagccagaaggatgtcattgagcagcta
cagaccactcaaaccatccaggacatcctgtctaacttcaagcttcgagcattcctagat
aacaagtacgtggtccgtctccaggaagacagctacaactaccttatccgctacctccaa
agtgacaacaacaccgccctgtgcaaagtcctcaccttgcatatccatcttgacgtgcag
cctgccaagagaacagattaccagctctatgccagcggcagctcctctcgaagcgagggc
aacggcttggagcccactgacatgcccgcccctattctgcagaacgaggctgccctggag
gtcttgcaggagagcattaagcgcgtcaaggacggccccccctccctcactaccatctgc
ttctatgccttctataacacagagcagctgctgaacaccgcagaaatctccccggacagc
aagctgctcgctgctgggtttgacaactcctgtataaaactgtggagtttacgatccaag
aagttaaaatcagaaccccatcaagtagacgtgtcccgcatccacttggcttgtgacatt
ctggaggaggaggtatga

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