Ursus arctos (brown bear): 113259132
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Entry
113259132 CDS
T05909
Symbol
COL13A1
Name
(RefSeq) collagen alpha-1(XIII) chain isoform X1
KO
K16617
collagen type XIII alpha
Organism
uah
Ursus arctos (brown bear)
Pathway
uah04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
uah00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
113259132 (COL13A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
uah00536
]
113259132 (COL13A1)
Glycosaminoglycan binding proteins [BR:
uah00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113259132 (COL13A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
113259132
NCBI-ProteinID:
XP_057164668
LinkDB
All DBs
Position
Unknown
AA seq
597 aa
AA seq
DB search
MPGRVGVKGQPGEKGAPGDAGMSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGPKGE
MGLTGPRGQPGPQGQKGEKGQCGEYPHREHLSSTLSALRSNQIITLKGEQGQAGIQGPPG
PPGPPGPSGPLGPPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAKG
APGISVAGMKGEPGTPGAKGEKGAAGPPGLLGLLGQKGEKGDAGNSIGGGRGEPGPPGLP
GPPGPKGEAGADGQAGPPGRQGDKGEPGAAGDQGPAGPKGTKGEPGKGEMVDYNGNISEA
LQEIRTLALMGPPGLPGQIGPPGAPGVPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGP
QGPPGKSGPAGMRGEDGHAGSPGEKGEKGEMGQAGAPGLDGPTGEKGEPGGQGRPGATGL
PGPIGLPGFTGERGEPGEKGEPGVEVPGPPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEK
GVQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGERGSKGDLGMTGPTGAA
GLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCPLGEDGLPVQGCWNK
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgcctggacgtgtgggagtaaagggccaaccaggcgagaagggggccccaggagatgcc
ggcatgtccatcatcggcccccgcggcccccctggtcagccgggcactcgaggtttccct
ggatttccgggtcccattgggctcgatggcaaaccgggccaccccggacccaaaggggag
atgggcctgacgggtccccgaggacagccgggacctcaaggacaaaaaggagaaaagggt
cagtgcggagagtacccacatcgggagcacctaagcagcactctatcggctctgcgctcc
aaccagatcattaccctgaagggtgaacagggccaggccggtatccaaggcccgccgggg
ccaccaggcccccctggaccgagcggacctctggggcccccgggactgccagggcccatg
gggccacctggcttacccgggcctcctggaccgaagggagacccaggaatccagggctac
cacggccggaagggagaacggggcatgccagggatgccaggcaaacatggagcaaaggga
gctcctggaatttctgtggctgggatgaagggtgagccagggaccccaggagccaagggc
gaaaagggggctgcaggcccccctgggctactaggcctcctggggcagaagggagaaaaa
ggcgatgctggcaactccatcggagggggcagaggggagcctggccccccaggactacct
gggcccccagggccaaagggagaagccggcgctgatggccaggccggccccccgggacgg
caaggagacaagggagagcccggagcagctggagaccagggaccagcgggccccaagggc
accaagggggaaccagggaaaggggagatggtggactacaacggaaacatcagcgaggct
ctccaggagatccgaacgctggccttgatggggccccctggtcttcccggacaaatcggc
ccacccggagctccaggggtcccaggccagaagggagagatcggacttccaggccctcca
ggccacgacggggaaaagggacctcgaggcaagccaggagacatgggccctcctggtccc
caaggccccccaggaaagtctgggcctgcaggaatgaggggagaagacggacacgcagga
agcccgggagagaagggggagaaaggggagatgggacaggcgggcgcaccgggtctagac
ggcccaactggggagaaaggagaaccaggtggccaagggagacccggagcaacaggattg
cccggccctatcgggctcccgggatttacaggagagagaggagagcccggggagaagggg
gagccaggagtggaggttcctgggcctccagggccagaggggccccccggacctccgggg
ctccaaggtgttcctggaccaaagggggaagcaggactagatggagcaaaaggagagaag
ggtgtccagggagagaaaggagatcgagggccgctgggattacccggagcttcaggtttg
gacggcaggcctgggccaccgggtactcccggaccaatcggagtcccaggcccagcggga
ccaaagggtgagaggggcagcaaaggcgacctggggatgacaggaccaacaggagcggct
gggcttcctggtttacatggaccacctggggacaaaggaaaccggggggagagggggaag
aaaggctctagagggcctaaaggggataagggagaccaaggagcgcctggattagatgcc
ccctgcccattgggcgaagacggcttaccggtccagggctgttggaacaagtga
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